From 303efec33360f77648cc2c7583934cdfd1ae76ae Mon Sep 17 00:00:00 2001 From: gmungoc Date: Wed, 24 Aug 2016 14:31:37 +0100 Subject: [PATCH] JAL-1424 removed unused and duplicated message keys --- resources/lang/Messages.properties | 63 +++-------------------- resources/lang/Messages_es.properties | 75 ++++------------------------ src/jalview/appletgui/APopupMenu.java | 2 +- src/jalview/appletgui/FeatureRenderer.java | 15 +++--- src/jalview/datamodel/AlignmentView.java | 3 +- src/jalview/gui/DasSourceBrowser.java | 2 +- src/jalview/gui/FeatureRenderer.java | 10 ++-- 7 files changed, 37 insertions(+), 133 deletions(-) diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties index ac665e3..1e91f35 100644 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@ -38,7 +38,6 @@ action.cancel = Cancel action.create = Create action.update = Update action.delete = Delete -action.snapshot = Snapshot action.clear = Clear action.accept = Accept action.select_ddbb = --- Select Database --- @@ -121,7 +120,6 @@ action.save_as_default = Save as default action.save_as = Save as... action.save = Save action.cancel_fetch = Cancel Fetch -action.save_omit_hidden_columns = Save / Omit Hidden Regions action.change_font = Change Font action.change_font_tree_panel = Change Font (Tree Panel) action.colour = Colour @@ -137,21 +135,22 @@ action.show_group = Show Group action.fetch_db_references = Fetch DB References action.view_flanking_regions = Show flanking regions label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment -label.str = Str: -label.seq = Seq: label.structures_manager = Structures Manager label.nickname = Nickname: label.url = URL: label.input_file_url = Enter URL or Input File -label.select_feature = Select feature: +label.select_feature = Select feature label.name = Name +label.name\: = Name: label.name_param = Name: {0} label.group = Group +label.group\: = Group: label.group_name = Group Name label.group_description = Group Description label.edit_group_name_description = Edit Group Name/Description label.colour = Colour: -label.description = Description: +label.description = Description +label.description\: = Description: label.start = Start: label.end = End: label.current_parameter_set_name = Current parameter set name: @@ -240,7 +239,6 @@ label.except_selected_sequences = All except selected sequences label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H) label.selected_region = Selected Region label.all_sequences_columns = All Sequences and Columns -label.hide_insertions = Hide columns gapped for selection label.hide_selected_annotations = Hide selected annotations label.show_selected_annotations = Show selected annotations label.group_consensus = Group Consensus @@ -365,7 +363,6 @@ label.example = Example label.example_param = Example: {0} label.select_file_format_before_saving = You must select a file format before saving! label.file_format_not_specified = File format not specified -label.alignment_contains_hidden_columns = The Alignment contains hidden regions (hidden sequences/columns).\nDo you want to save only the visible alignment? label.couldnt_save_file = Couldn't save file: {0} label.error_saving_file = Error Saving File label.remove_from_default_list = Remove from default list? @@ -467,7 +464,6 @@ label.no_features_added_to_this_alignment = No Features added to this alignment! label.features_can_be_added_from_searches_1 = (Features can be added from searches or label.features_can_be_added_from_searches_2 = from Jalview / GFF features files) label.calculating_pca= Calculating PCA -label.reveal_columns = Reveal Columns label.jalview_cannot_open_file = Jalview can't open file label.jalview_applet = Jalview applet label.loading_data = Loading data @@ -475,7 +471,6 @@ label.memory_stats = Total Free Memory: {0} MB; Max Memory: {1} MB; {2} % label.calculating_tree = Calculating tree label.state_queueing = queuing label.state_running = running -label.state_complete = complete label.state_completed = finished label.state_job_cancelled = job cancelled!! label.state_job_error = job error! @@ -501,7 +496,6 @@ label.jmol_help = Jmol Help label.chimera_help = Chimera Help label.close_viewer = Close Viewer label.confirm_close_chimera = This will close Jalview''s connection to {0}.
Do you want to close the Chimera window as well? -label.chimera_help = Chimera Help label.all = All label.sort_by = Sort alignment by label.sort_by_score = Sort by Score @@ -529,7 +523,6 @@ label.toggle_absolute_relative_display_threshold = Toggle between absolute and r label.display_features_same_type_different_label_using_different_colour = Display features of the same type with a different label using a different colour. (e.g. domain features) label.select_colour_minimum_value = Select Colour for Minimum Value label.select_colour_maximum_value = Select Colour for Maximum Value -label.open_new_jmol_view_with_all_structures_associated_current_selection_superimpose_using_alignment = Open a new structure viewer with all structures associated with the current selection and superimpose them using the alignment. label.open_url_param = Open URL {0} label.open_url_seqs_param = Open URL ({0}..) ({1} seqs) label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0} @@ -584,8 +577,8 @@ label.histogram = Histogram label.logo = Logo label.non_positional_features = List Non-positional Features label.database_references = List Database References -label.share_selection_across_views = Share selection across views -label.scroll_highlighted_regions = Scroll to highlighted regions +#label.share_selection_across_views = Share selection across views +#label.scroll_highlighted_regions = Scroll to highlighted regions label.gap_symbol = Gap Symbol label.prot_alignment_colour = Protein Alignment Colour label.nuc_alignment_colour = Nucleotide Alignment Colour @@ -668,20 +661,12 @@ label.cut_paste = Cut'n'Paste label.adjusting_parameters_for_calculation = Adjusting parameters for existing Calculation label.2d_rna_structure_line = 2D RNA {0} (alignment) label.2d_rna_sequence_name = 2D RNA - {0} -label.edit_name_and_description_current_group = Edit name and description of current group. -label.view_structure_for = View structure for {0} -label.view_all_structures = View all {0} structures. -label.view_all_representative_structures = View all {0} representative structures. -label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new structure viewer with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment. -label.associate_structure_with_sequence = Associate Structure with Sequence +label.edit_name_and_description_current_group = Edit name and description of current group label.from_file = From File label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode) -label.discover_pdb_ids = Discover PDB IDs label.text_colour = Text Colour action.set_text_colour = Text Colour... label.structure = Structure -label.view_structure = View Structure -label.view_protein_structure = View Protein Structure label.show_pdbstruct_dialog = 3D Structure Data... label.view_rna_structure = VARNA 2D Structure label.clustalx_colours = Clustalx colours @@ -709,7 +694,6 @@ label.translate_cDNA = Translate as cDNA label.reverse = Reverse label.reverse_complement = Reverse Complement label.linked_view_title = Linked CDS and protein view -label.align = Align label.extract_scores = Extract Scores label.get_cross_refs = Get Cross-References label.sort_alignment_new_tree = Sort Alignment With New Tree @@ -721,7 +705,6 @@ label.use_registry = Use Registry label.add_local_source = Add Local Source label.set_as_default = Set as Default label.show_labels = Show labels -label.background_colour = Background Colour action.background_colour = Background Colour... label.associate_nodes_with = Associate Nodes With label.jalview_pca_calculation = Jalview PCA Calculation @@ -814,7 +797,6 @@ label.services_at = Services at {0} label.rest_client_submit = {0} using {1} label.fetch_retrieve_from =Retrieve from {0} label.fetch_retrieve_from_all_sources = Retrieve from all {0} sources in {1}
First is :{2} -#label.feature_settings_click_drag = Click/drag feature types up or down to change render order.
Double click to select columns containing feature in alignment/current selection
Pressing Alt will select columns outside features rather than inside
Pressing Shift to modify current selection (rather than clear current selection)
Press CTRL or Command/Meta to toggle columns in/outside features
label.feature_settings_click_drag = Drag up or down to change render order.
Double click to select columns containing feature. label.transparency_tip = Adjust transparency to 'see through' feature colours. label.opt_and_params_further_details = see further details by right-clicking @@ -830,17 +812,10 @@ label.user_preset = User Preset label.service_preset = Service Preset label.run_with_preset = Run {0} with preset label.view_service_doc_url = View {1} -label.submit_sequence = Submit {0} {1} {2} {3} to
{4} action.by_title_param = By {0} -label.alignment = Alignment -label.secondary_structure_prediction = Secondary Structure Prediction -label.sequence_database_search = Sequence Database Search -label.analysis = Analysis -label.protein_disorder = Protein Disorder label.source_from_db_source = Sources from {0} label.from_msname = from {0} label.superpose_with = Superpose with -action.do = Do label.scale_label_to_column = Scale Label to Column label.add_new_row = Add New Row label.edit_label_description = Edit Label/Description @@ -900,7 +875,6 @@ label.save_vamsas_document_archive = Save Vamsas Document Archive label.saving_vamsas_doc = Saving VAMSAS Document to {0} label.load_feature_colours = Load Feature Colours label.save_feature_colours = Save Feature Colour Scheme -label.dataset_for = {0} Dataset for {1} label.select_startup_file = Select startup file label.select_default_browser = Select default web browser label.save_tree_as_newick = Save tree as newick file @@ -929,14 +903,8 @@ error.implementation_error_sortbyfeature = Implementation Error - sortByFeature error.not_yet_implemented = Not yet implemented error.unknown_type_dna_or_pep = Unknown Type {0} - dna or pep are the only allowed values. error.implementation_error_dont_know_thereshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient. -error.implementation_error_embeddedpopup_not_null = Implementation error - embeddedPopup must be non-null -error.invalid_colour_for_mycheckbox = Invalid color for MyCheckBox -error.implementation_error_unrecognised_render_object_for_features_type = Implementation Error: Unrecognised render object {0} for features of type {1} -error.implementation_error_unsupported_feature_colour_object = Implementation error: Unsupported feature colour object. error.invalid_separator_parameter = Invalid separator parameter - must be non-zero length error.alignment_cigararray_not_implemented = Alignment(CigarArray) not yet implemented -error.weak_sequencei_equivalence_not_yet_implemented = Weak sequenceI equivalence not yet implemented. -error.implementation_error_can_only_make_alignmnet_from_cigararray = Implementation Error - can only make an alignment view from a CigarArray of sequences. error.empty_view_cannot_be_updated = empty view cannot be updated. error.mismatch_between_number_of_sequences_in_block = Mismatch between number of sequences in block {0} ({1}) and the original view ({2}) error.padding_not_yet_implemented = Padding not yet implemented @@ -958,12 +926,10 @@ error.not_yet_implemented_cigar_object_from_cigar_string = NOT YET Implemented: error.implementation_bug_cigar_operation = Implementation Bug. Cigar Operation {0} {1} not one of {2}, {3}, or {4}. error.implementation_error_for_new_cigar = Implementation error for new Cigar(SequenceI) error.implementation_error_cigar_seq_no_operations = Implementation error: {0}th sequence Cigar has no operations. -error.implementation_error_jmol_getting_data = Implementation error - Jmol seems to be still working on getting its data - report at http://issues.jalview.org/browse/JAL-1016 error.implementation_error_no_pdbentry_from_index = Implementation error - no corresponding pdbentry (for index {0}) to add sequences mappings to error.jmol_version_not_compatible_with_jalview_version = Jmol version {0} is not compatible with this version of Jalview. Report this problem at issues.jalview.org error.not_implemented_remove = Remove: Not implemented error.not_implemented_clone = Clone: Not implemented -error.implementation_error_chimera_getting_data = Implementation error - Chimera seems to be still working on getting its data - report at http://issues.jalview.org/browse/JAL-1016 error.call_setprogressbar_before_registering_handler = call setProgressBar before registering the progress bar's handler. label.cancelled_params = Cancelled {0} error.implementation_error_cannot_show_view_alignment_frame = Implementation error: cannot show a view from another alignment in an AlignFrame. @@ -986,7 +952,6 @@ error.setstatus_called_non_existent_job_pane = setStatus called for non-existent error.implementation_error_cannot_find_marshaller_for_param_set =Implementation error: Can't find a marshaller for the parameter set error.implementation_error_old_jalview_object_not_bound =IMPLEMENTATION ERROR: old jalview object is not bound ! ({0}) error.implementation_error_vamsas_doc_class_should_bind_to_type = Implementation Error: Vamsas Document Class {0} should bind to a {1} (found a {2}) -error.implementation_error_jalview_class_should_bind_to_type = Implementation Error: Jalview Class {0} should bind to a {1} (found a {2}) error.invalid_vamsas_rangetype_cannot_resolve_lists = Invalid vamsas RangeType - cannot resolve both lists of Pos and Seg from choice! error.implementation_error_maplist_is_null = Implementation error. MapList is null for initMapType. error.implementation_error_cannot_have_null_alignment = Implementation error: Cannot have null alignment property key @@ -1033,7 +998,6 @@ label.toggled = Toggled label.marked = Marked label.containing = containing label.not_containing = not containing -label.not = not label.no_feature_of_type_found = No features of type {0} found. label.submission_params = Submission {0} label.empty_alignment_job = Empty Alignment Job @@ -1063,7 +1027,6 @@ exception.mismatched_unseen_closing_char = Mismatched (unseen) closing character exception.mismatched_closing_char = Mismatched closing character {0} exception.mismatched_opening_char = Mismatched opening character {0} at {1} exception.invalid_datasource_couldnt_obtain_reader = Invalid datasource. Could not obtain Reader -exception.index_value_not_in_range = {0}: Index value {1} not in range [0..{2}] exception.unterminated_cigar_string = Unterminated cigar string exception.unexpected_operation_cigar_string_pos = Unexpected operation {0} in cigar string (position {1} in {2} exception.couldnt_parse_responde_from_annotated3d_server = Couldn't parse response from Annotate3d server @@ -1091,7 +1054,6 @@ exception.ranml_problem_parsing_data = Problem parsing data as RNAML ({0}) exception.pfam_no_sequences_found = No sequences found (PFAM input) exception.stockholm_invalid_format = This file is not in valid STOCKHOLM format: First line does not contain '# STOCKHOLM' exception.couldnt_parse_sequence_line = Could not parse sequence line: {0} -exception.error_parsing_line = Error parsing {0} exception.unknown_annotation_detected = Unknown annotation detected: {0} {1} exception.couldnt_store_sequence_mappings = Couldn't store sequence mappings for {0} exception.matrix_too_many_iteration = Too many iterations in {0} (max is {1}) @@ -1099,7 +1061,6 @@ exception.browser_not_found = Exception in finding browser: {0} exception.browser_unable_to_locate = Unable to locate browser: {0} exception.invocation_target_exception_creating_aedesc = InvocationTargetException while creating AEDesc: {0} exception.illegal_access_building_apple_evt= IllegalAccessException while building AppleEvent: {0} -exception.instantiation_creating_aedesc = InstantiationException while creating AEDesc: {0} exception.unable_to_launch_url = Unable to launch URL: {0} exception.unable_to_create_internet_config = Unable to create an Internet Config instance: {0} exception.invocation_target_calling_url = InvocationTargetException while calling openURL: {0} @@ -1108,8 +1069,6 @@ exception.interrupted_launching_browser = InterruptedException while launching b exception.das_source_doesnt_support_sequence_command = Source {0} does not support the sequence command. exception.invalid_das_source = Invalid das source: {0} exception.ebiembl_retrieval_failed_on = EBI EMBL XML retrieval failed on {0}:{1} -label.no_embl_record_found = # No EMBL record retrieved for {0}:{1} -label.embl_successfully_parsed = # Successfully parsed the {0} queries into an Alignment exception.no_pdb_records_for_chain = No PDB Records for {0} chain {1} exception.unexpected_handling_rnaml_translation_for_pdb = Unexpected exception when handling RNAML translation of PDB data exception.couldnt_recover_sequence_properties_for_alignment = Couldn't recover sequence properties for alignment @@ -1222,28 +1181,23 @@ label.no_colour_selection_in_scheme = Please make a colour selection before appl label.no_colour_selection_warn = Error saving colour scheme label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked? label.open_split_window = Open split window -label.no_mappings = No mappings found action.no = No action.yes = Yes label.for = for label.select_by_annotation = Select/Hide Columns by Annotation action.select_by_annotation = Select/Hide Columns by Annotation... label.threshold_filter = Threshold Filter -action.hide = Hide -action.select = Select label.alpha_helix = Alpha Helix label.beta_strand = Beta Strand label.turn = Turn label.select_all = Select All label.structures_filter = Structures Filter label.search_filter = Search Filter -label.description = Description label.include_description= Include Description action.back = Back label.hide_insertions = Hide Insertions label.mark_as_representative = Mark as representative label.open_jabaws_web_page = Open JABAWS web page -label.opens_the_jabaws_server_homepage = Opens the JABAWS server's homepage in web browser label.pdb_sequence_fetcher = PDB Sequence Fetcher label.result = result label.results = results @@ -1311,6 +1265,5 @@ status.obtaining_mapping_with_sifts = Obtaining mapping with SIFTS status.obtaining_mapping_with_nw_alignment = Obtaining mapping with NW alignment status.exporting_alignment_as_x_file = Exporting alignment as {0} file label.column = Column -label.sequence = Sequence label.cant_map_cds = Unable to map CDS to protein\nCDS missing or incomplete label.operation_failed = Operation failed diff --git a/resources/lang/Messages_es.properties b/resources/lang/Messages_es.properties index 92d4d78..4738440 100644 --- a/resources/lang/Messages_es.properties +++ b/resources/lang/Messages_es.properties @@ -38,7 +38,6 @@ action.cancel = Cancelar action.create = Crear action.update = Actualizar action.delete = Borrar -action.snapshot = Imagen action.clear = Limpiar action.accept = Aceptar action.select_ddbb = --- Seleccionar base de datos --- @@ -118,7 +117,6 @@ action.save_as_default = Guardar como por defecto action.save_as = Guardar como action.save = Guardar action.cancel_fetch = Cancelar búsqueda -action.save_omit_hidden_columns = Guardar / Omitir las columnas ocultas action.change_font = Cambiar Fuente action.change_font_tree_panel = Cambiar fuente (panel del árbol) action.colour = Color @@ -134,21 +132,22 @@ action.show_group = Mostrar grupo action.fetch_db_references = Recuperar referencias a base de datos action.view_flanking_regions = Mostrar flancos label.view_flanking_regions = Mostrar los datos de la secuencia a ambos lados de las subsecuencias implicadas en este alineamiento -label.str = Str: -label.seq = Seq: label.structures_manager = Administrar estructuras label.nickname = Sobrenombre: label.url = URL: label.input_file_url = Introducir URL en el fichero de entrada -label.select_feature = Seleccionar función: -label.name = Nombre: +label.select_feature = Seleccionar característica +label.name = Nombre +label.name\: = Nombre: label.name_param = Nombre: {0} -label.group = Grupo: +label.group = Grupo +label.group\: = Grupo: label.group_name = Nombre del grupo label.group_description = Descripción del grupo label.edit_group_name_description = Editar nombre/descripción del grupo label.colour = Color: -label.description = Descripción: +label.description = Descripción +label.description\: = Descripción: label.start = Comenzar: label.end = Terminar: label.current_parameter_set_name = Nombre actual del conjunto de parámetros: @@ -217,7 +216,6 @@ label.documentation = Documentaci label.about = Acerca de... label.show_sequence_limits = Mostrar los límites de la secuencia label.feature_settings = Ajustar funciones... -label.sequence_features = Funciones de la secuencia label.all_columns = Todas las columnas label.all_sequences = Todas las secuencias label.selected_columns = Columnas seleccionadas @@ -315,8 +313,6 @@ label.blog_item_published_on_date = {0} {1} label.select_das_service_from_table = Seleccionar servicio DAS de la tabla para leer una descripción completa aquí. label.session_update = Actualizar sesión label.new_vamsas_session = Nueva sesión Vamsas -label.load_vamsas_session = Cargar sesión Vamsas -label.save_vamsas_session = Guardar sesión Vamsas action.save_vamsas_session = Guardar Sesión Vamsas label.select_vamsas_session_opened_as_new_vamsas_session= Selecciones una sesión vamsas para abrirla como una nueva sesión. label.open_saved_vamsas_session = Abrir una sesión VAMSAS guardada @@ -336,7 +332,6 @@ label.example = Ejemplo label.example_param = Ejemplo: {0} label.select_file_format_before_saving = Debe seleccionar un formato de fichero antes de guardar! label.file_format_not_specified = Formato de fichero no especificado -label.alignment_contains_hidden_columns = El alineamiento contiene columnas ocultas.\nQuieres guardar s\u00F3lo el alineamiento visible? label.couldnt_save_file = No se pudo guardar el fichero: {0} label.error_saving_file = Error guardando el fichero label.remove_from_default_list = eliminar de la lista de defectuosos? @@ -436,7 +431,6 @@ label.no_features_added_to_this_alignment = No hay funciones asociadas a este al label.features_can_be_added_from_searches_1 = (Las funciones pueden ser añadidas de búsquedas o label.features_can_be_added_from_searches_2 = de ficheros de funciones Jalview / GFF) label.calculating_pca= Calculando PCA -label.reveal_columns = Mostrar Columnas label.jalview_cannot_open_file = Jalview no puede abrir el fichero label.jalview_applet = Aplicación Jalview label.loading_data = Cargando datos @@ -444,7 +438,6 @@ label.memory_stats = Memoria libre total: {0} MB; Memoria m label.calculating_tree = Calculando árbol label.state_queueing = En cola label.state_running = Procesando -label.state_complete = Completar label.state_completed = Finalizado label.state_job_cancelled = ¡Trabajo cancelado! label.state_job_error = Error del trabajo! @@ -458,8 +451,6 @@ label.load_associated_tree = Cargar label.load_features_annotations = Cargar características/anotaciones ... label.export_features = Exportar características... label.export_annotations = Exportar anotaciones ... -label.jalview_copy = Copiar (sólo Jalview) -label.jalview_cut = Cortar (sólo Jalview) label.to_upper_case = Pasar a mayúsculas label.to_lower_case = Pasar a minúsculas label.toggle_case = Alternar mayúsculas y minúsculas @@ -494,7 +485,6 @@ label.toggle_absolute_relative_display_threshold = Cambiar entre mostrar el umbr label.display_features_same_type_different_label_using_different_colour = Mostrar las características del mismo tipo con una etiqueta diferente y empleando un color distinto (p.e. características del dominio) label.select_colour_minimum_value = Seleccionar el color para el valor mínimo label.select_colour_maximum_value = Seleccionar el color para el valor máximo -label.open_new_jmol_view_with_all_structures_associated_current_selection_superimpose_using_alignment = Abrir una nueva vista Jmol con todas las estructuras asociadas con la selección acxtual y superponer las utilizando el alineamiento. label.open_url_param = Abrir URL {0} label.open_url_seqs_param = Abrir URL ({0}..) ({1} secuencias) label.load_pdb_file_associate_with_sequence = Cargar un fichero PDB y asociarlo con la secuencia {0} @@ -545,10 +535,9 @@ label.histogram = Histograma label.logo = Logo label.non_positional_features = Características no posicionales label.database_references = Referencias a base de datos -label.share_selection_across_views = Compartir la selección en todas las vistas -label.scroll_highlighted_regions = Desplazarse hasta las regiones resaltadas +#label.share_selection_across_views = Compartir la selección en todas las vistas +#label.scroll_highlighted_regions = Desplazarse hasta las regiones resaltadas label.gap_symbol = Símbolo del hueco -label.alignment_colour = Color del alineamiento label.address = Dirección label.port = Puerto label.default_browser_unix = Navegador por defecto (Unix) @@ -627,18 +616,11 @@ label.cut_paste = Cortar y pegar label.adjusting_parameters_for_calculation = Ajustar los parámetros para el cálculo existente label.2d_rna_structure_line = 2D RNA {0} label.2d_rna_sequence_name = 2D RNA - {0} -label.edit_name_and_description_current_group = Editar el nombre y la descripción del grupo actual. -label.view_structure_for = Visualizar la estructura para {0} -label.view_all_structures = Visualizar todas las {0} estructuras. -label.view_all_representative_structures = Visualizar todas las {0} estructuras representativas. -label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Abrir una nueva vista de Jmol con todas las estructuras representativas\nasociadas con la selecci\u00F3n actual\nsuperpuesta con el alineamiento actual. -label.associate_structure_with_sequence = Asociar estructura con la secuencia +label.edit_name_and_description_current_group = Editar el nombre y la descripción del grupo actual label.from_file = desde fichero label.enter_pdb_id = Introducir PDB Id -label.discover_pdb_ids = Buscar PDB ids label.text_colour = Color del texto label.structure = Estructura -label.view_structure = Visualizar estructura label.clustalx_colours = Colores de Clustalx label.above_identity_percentage = Sobre % identidad label.create_sequence_details_report_annotation_for = Anotación para {0} @@ -671,7 +653,6 @@ label.use_registry = Utilizar el registro label.add_local_source = Añadir fuente local label.set_as_default = Establecer por defecto label.show_labels = Mostrar etiquetas -label.background_colour = Color de fondo label.associate_nodes_with = Asociar nodos con label.jalview_pca_calculation = Cálculo del PCA por Jalview label.link_name = Nombre del enalce @@ -764,17 +745,10 @@ label.user_preset = Preselecci label.service_preset = Preselección del servicio label.run_with_preset = Ejecutar {0} con preselección label.view_service_doc_url = Visualizar {1} -label.submit_sequence = Enviar {0} {1} {2} {3} a
{4} action.by_title_param = por {0} -label.alignment = Alineamiento -label.secondary_structure_prediction = Predicción de la estructura secundaria -label.sequence_database_search = Búsqueda en base de datos de secuencias -label.analysis = Análisis -label.protein_disorder = Desorden en la proteína label.source_from_db_source = Fuentes de {0} label.from_msname = de {0} label.superpose_with = Superponer con... -action.do = Hacer label.scale_label_to_column = Ajustar la etiqueta a la columna label.add_new_row = Añadir nuevo fila label.edit_label_description = Editar etiqueta/descripción @@ -834,7 +808,6 @@ label.save_vamsas_document_archive = Guardar el archivo de documento Vamsas label.saving_vamsas_doc = Guardando el documento VAMSAS en {0} label.load_feature_colours = Cargar colores de características label.save_feature_colours = Guardar esquema cromático de características -label.dataset_for = {0} conjunto de datos para {1} label.select_startup_file = Seleccionar fichero de arranque label.select_default_browser = Seleccionar navegador web por defecto label.save_tree_as_newick = Guardar árbol como fichero newick @@ -863,14 +836,8 @@ error.implementation_error_sortbyfeature = Error de implementaci error.not_yet_implemented = No se ha implementado todavía error.unknown_type_dna_or_pep = Tipo desconocido {0} - dna o pep son los únicos valores permitidos error.implementation_error_dont_know_thereshold_annotationcolourgradient = Error de implementación: no se conoce el valor umbral para el AnnotationColourGradient actual. -error.implementation_error_embeddedpopup_not_null = Error de implementación - embeddedPopup debe ser no nulo. -error.invalid_colour_for_mycheckbox = Color no válido para MyCheckBox -error.implementation_error_unrecognised_render_object_for_features_type = Error de implementación: no se reconoce el objeto de representación {0} para las características de tipo {1} -error.implementation_error_unsupported_feature_colour_object = Error de implementación: objeto de color de características no soportado. error.invalid_separator_parameter = Separador de parámetros no válido - debe tener longitud mayor que cero error.alignment_cigararray_not_implemented = Alignment(CigarArray) no se ha implementado todavía -error.weak_sequencei_equivalence_not_yet_implemented = Equivalencia débil sequenceI no se ha implementado todavía. -error.implementation_error_can_only_make_alignmnet_from_cigararray = Error de implementación - sólo se puede construir un vista de alineamiento a partir de una CigarArray de secuencias. error.empty_view_cannot_be_updated = una vista vacía no se puede actualizar. error.mismatch_between_number_of_sequences_in_block = No hay coincidencia entre el número de secuencias en el bloque {0} ({1}) y la vista original ({2}) error.padding_not_yet_implemented = El relleno no se ha implementado todavía @@ -892,12 +859,10 @@ error.not_yet_implemented_cigar_object_from_cigar_string = No implementado todav error.implementation_bug_cigar_operation = Bug de implementación. La operación Cigar {0} {1} no es ni {2}, ni {3} ni {4}. error.implementation_error_for_new_cigar = Error de implementación en new Cigar(SequenceI) error.implementation_error_cigar_seq_no_operations = Error de implementación: la {0}a secuencia Cigar no tiene operaciones. -error.implementation_error_jmol_getting_data = Error de implementación - Jmol parece estar todavía intentando recuperar sus datos - informe de ello en http://issues.jalview.org/browse/JAL-1016 error.implementation_error_no_pdbentry_from_index = Error de implementación - no existe la correspondiente entrada pdb (para el índice {0}) para añadir el mapeo de secuencias a error.jmol_version_not_compatible_with_jalview_version = La versión {0} de Jmol no es compatible con esta versión de Jalview. Informe de este problema en http://issues.jalview.org error.not_implemented_remove = Borrar: no implementado error.not_implemented_clone = Clonar: no implementado -error.implementation_error_chimera_getting_data = Error de implementación - Chimera parece estar todavía intentando recuperar sus datos - informe de ello en http://issues.jalview.org/browse/JAL-1016 error.call_setprogressbar_before_registering_handler = llamada a setProgressBar antes de registrar el manejador de la barra de estado label.cancelled_params = {0} cancelado error.implementation_error_cannot_show_view_alignment_frame = Error de implementación: no es posible mostrar una vista de otro alineamiento en un AlignFrame. @@ -920,7 +885,6 @@ error.setstatus_called_non_existent_job_pane = se lllamado a setStatus para el p error.implementation_error_cannot_find_marshaller_for_param_set =Error de implementación: no puede encontrar un marshaller para el conjunto de parámetros error.implementation_error_old_jalview_object_not_bound =Error de implementación: ¡el objeto Jalview antiguo no está enlazado! ({0}) error.implementation_error_vamsas_doc_class_should_bind_to_type = Error de implementación: la clase de documento VAMSAS {0} debe enlazar a {1} (pero se ha encontrado que lo está a {2}) -error.implementation_error_jalview_class_should_bind_to_type = Error de implementación: la clase Jalview {0} debe enlazar a {1} (pero se ha encontrado que lo está a {2}) error.invalid_vamsas_rangetype_cannot_resolve_lists = RangeType VAMSAS no válido - ¡no es posible resolver ambas listas de Pos y Seg con los valores elegidos! error.implementation_error_maplist_is_null = Error de implementación. MapList es nulo en initMapType. error.implementation_error_cannot_have_null_alignment = Error de implementación: no es posible tener una clave nula en el alineamiento @@ -967,7 +931,6 @@ label.toggled = Invertida label.marked = Marcada label.containing = conteniendo label.not_containing = no conteniendo -label.not = no label.no_feature_of_type_found = No se han encontrado características del tipo {0}. label.submission_params = Envío {0} label.empty_alignment_job = Trabajo de alineamiento vacío @@ -997,7 +960,6 @@ exception.mismatched_unseen_closing_char = Discordancia (no vista) en el car exception.mismatched_closing_char = Carácter de cierre discordante {0} exception.mismatched_opening_char = Carácter de apertura discordante {0} en {1} exception.invalid_datasource_couldnt_obtain_reader = Fuente de datos no válida. No es posible obtener el Reader -exception.index_value_not_in_range = {0}: el valor del índice {1} en se encuentra en el rango [0..{2}] exception.unterminated_cigar_string = Cadena cigar sin terminar exception.unexpected_operation_cigar_string_pos = Operación no esperada {0} en una cadena cigar (posición {1} en {2}) exception.couldnt_parse_responde_from_annotated3d_server = No es posible parsear la respuesta procedente del servidor Annotate3d @@ -1025,7 +987,6 @@ exception.ranml_problem_parsing_data = Problema parseando los datos como RNAML ( exception.pfam_no_sequences_found = No se han encontrado secuencias (entrada PFAM) exception.stockholm_invalid_format = Este fichero no es tiene un formato STOCKHOLM válido: la primera línea no contiene '# STOCKHOLM' exception.couldnt_parse_sequence_line = No es posible parse la línea de secuencia: {0} -exception.error_parsing_line = Error parseando {0} exception.unknown_annotation_detected = Anotación desconocida detectada: {0} {1} exception.couldnt_store_sequence_mappings = No es posible almacenar los mapeos de secuencia para {0} exception.matrix_too_many_iteration = Demasiadas iteraciones en {0} (el máximo es {1}) @@ -1033,7 +994,6 @@ exception.browser_not_found = Excepci exception.browser_unable_to_locate = Imposible encontrar el navegador: {0} exception.invocation_target_exception_creating_aedesc = InvocationTargetException mientras se creaba AEDesc: {0} exception.illegal_access_building_apple_evt= IllegalAccessException mientras se construía AppleEvent: {0} -exception.instantiation_creating_aedesc = InstantiationException mientras se creaba AEDesc: {0} exception.unable_to_launch_url = Imposible lanzar la URL: {0} exception.unable_to_create_internet_config = Imposible crear una instancia de configuración de Internet: {0} exception.invocation_target_calling_url = InvocationTargetException mientras se invocaba openURL: {0} @@ -1042,8 +1002,6 @@ exception.interrupted_launching_browser = InterruptedException mientras se lanza exception.das_source_doesnt_support_sequence_command = La fuente {0} no soporta el comando sequence. exception.invalid_das_source = Fuente DAS no válida: {0} exception.ebiembl_retrieval_failed_on = La recuperación de datos EBI EMBL XML ha fallado en {0}:{1} -label.no_embl_record_found = # No se ha recuperado ningún registro EMBL de {0}:{1} -label.embl_successfully_parsed = # Se han parseado con éxito las consultas {0} en un alineamiento exception.no_pdb_records_for_chain = No se han encontrado registros {0} para la cadena {1} exception.unexpected_handling_rnaml_translation_for_pdb = Excepcion inesperada cuando se traducían a RNAML los datos PDB exception.couldnt_recover_sequence_properties_for_alignment = No es posible recuperar las propiedades de la secuencia para el alineamiento @@ -1146,7 +1104,6 @@ action.feature_settings=Ajustes de caracter info.invalid_msa_notenough=No suficientes datos de sequencia para alinear label.result=resultado label.results=resultados -label.no_mappings=No hay mapeados encontrados label.struct_from_pdb=Procesar la estructura secundaria PDB label.hide_selected_annotations=Ocultar anotaciones seleccionados info.select_annotation_row=Seleccionar Fila de Anotaciones @@ -1170,7 +1127,6 @@ action.no=No action.yes=Sí label.export_settings=Exportar Ajustes label.linked_view_title=Vista vinculada de cDNA y proteína -label.view_protein_structure=Ver Estructura Proteica label.couldnt_read_data=No se pudo leer los datos status.opening_file=abriendo fichero label.except_selected_sequences=Todo excepto secuencias seleccionadas @@ -1215,7 +1171,6 @@ action.select_by_annotation=Seleccionar/Ocultar Columnas por Anotaci action.export_features=Exportar Características error.invalid_regex=Expresión regular inválida label.autoadd_temp=Añadir anotación factor de temperatura al alineamiento -tooltip.rnalifold_settings=Modificar la configuración de la predicción RNAAlifold. Úselo para ocultar o mostrar resultados del cálculo de RNA, o cambiar parámetros de el plegado de RNA. label.chimera_path_tip=Jalview intentará primero las rutas introducidas aquí, Y si no las rutas usuales de instalación label.structure_chooser=Selector de Estructuras label.structure_chooser_manual_association=Selector de Estructuras - asociación manual @@ -1231,9 +1186,7 @@ label.colour_with_chimera=Colorear con Chimera label.show_pdbstruct_dialog=Datos de Estructura 3D... label.hide_all=Ocultar todos label.invert=Invertir -label.pdb_sequence_getcher=Buscador de Secuencias PDB tooltip.aacon_settings=Cambiar ajustes para cálculos AACon -label.align=Alinear label.mark_as_representative=Marcar como representativa label.include_description=Incluir Descripción label.for=para @@ -1249,15 +1202,13 @@ info.associate_wit_sequence=Asociar con secuencia label.protein=Proteína warn.oneseq_msainput_selection=La selección actual sólo contiene una única secuencia. ¿Quieres enviar todas las secuencias para la alineación en su lugar? label.use_rnaview=Usar RNAView para estructura secondaria -label.opens_the_jabaws_server_homepage=Abre la página de inicio del servidor JABAWS en navegador label.search_all=Introducir uno o más valores de búsqueda separados por punto y coma ";" (Nota: buscará en toda la base de datos PDB) label.confirm_close_chimera=Cerrará la conexión de Jalview a {0}.
¿Quieres cerrar la ventana Chimera también? tooltip.rnalifold_calculations=Se calcularán predicciones de estructura secondaria de RNA para el alineaminento, y se actualizarán si se efectuan cambios -Calcular predicciónes de estructura secondaria para el alineamiento +tooltip.rnalifold_settings=Modificar la configuración de la predicción RNAAlifold. Úselo para ocultar o mostrar resultados del cálculo de RNA, o cambiar parámetros de el plegado de RNA. label.show_selected_annotations=Mostrar anotaciones seleccionadas status.colouring_chimera=Coloreando Chimera label.configure_displayed_columns=Configurar Columnas Mostradas -exception.pdb_server_error=Error desde el servidor PDB exception.resource_not_be_found=El recurso solicitado no se ha encontrado label.aacon_calculations=cálculos AACon label.pdb_web-service_error=Error de servicio web PDB @@ -1266,10 +1217,8 @@ label.chimera_path=Ruta de acceso a programa Chimera warn.delete_all=Borrar todas las secuencias cerrará la ventana del alineamiento.
Confirmar o Cancelar. label.select_all=Seleccionar Todos label.alpha_helix=Hélice Alfa -label.sequence_details_for=Detalles de secuencia para {0} label.chimera_help=Ayuda para Chimera label.find_tip=Buscar alineamiento, selección o IDs de secuencia para una subsecuencia (sin huecos) -exception.pdb_server_unreachable=Jalview no puede conectar con el servidor PDBE Solr.\nPor favor, asegúrese de que está conectado a Internet y vuelva a intentarlo. label.structure_viewer=Visualizador de estructura for defecto label.embbed_biojson=Incrustar BioJSON al exportar HTML label.transparency_tip=Ajustar la transparencia a "ver a través" los colores de las características. @@ -1282,7 +1231,6 @@ info.select_filter_option=Escoger Opci info.invalid_msa_input_mininfo=Necesita por lo menos dos secuencias con al menos 3 residuos cada una, sin regiones ocultas entre ellas. label.chimera_missing=Visualizador de estructura Chimera no encontrado.
Por favor, introduzca la ruta de Chimera,
o descargar e instalar la UCSF Chimera. label.save_as_biojs_html=Guardar como HTML BioJs -exception.pdb_rest_service_no_longer_available=Servicios Rest PDB ya no están disponibles! exception.fts_server_unreachable=Jalview no puede conectar con el servidor {0}. \nPor favor asegúrese de que está conectado a Internet y vuelva a intentarlo. exception.outofmemory_loading_mmcif_file=Sin memoria al cargar el fichero mmCIF label.hide_columns_not_containing=Ocultar las columnas que no contengan @@ -1318,6 +1266,5 @@ status.fetching_dbrefs_for_sequences_without_valid_refs=Buscando referencias par status.obtaining_mapping_with_nw_alignment=Obteniendo mapeo por alineamiento Needleman y Wunsch status.exporting_alignment_as_x_file = Exportando alineamiento como fichero tipo {0} label.column = Columna -label.sequence = Secuencia label.cant_map_cds = No se pudo mapear CDS a proteína\nDatos CDS faltantes o incompletos label.operation_failed = Operación fallada diff --git a/src/jalview/appletgui/APopupMenu.java b/src/jalview/appletgui/APopupMenu.java index b6cc7c0..ec7cd25 100644 --- a/src/jalview/appletgui/APopupMenu.java +++ b/src/jalview/appletgui/APopupMenu.java @@ -964,7 +964,7 @@ public class APopupMenu extends java.awt.PopupMenu implements "label.represent_group_with", new Object[] { "" })); revealAll.setLabel(MessageManager.getString("action.reveal_all")); revealSeq.setLabel(MessageManager.getString("action.reveal_sequences")); - menu1.setLabel(MessageManager.getString("label.group") + ":"); + menu1.setLabel(MessageManager.getString("label.group:")); add(groupMenu); this.add(seqMenu); this.add(hideSeqs); diff --git a/src/jalview/appletgui/FeatureRenderer.java b/src/jalview/appletgui/FeatureRenderer.java index 81d8ef5..82736d7 100644 --- a/src/jalview/appletgui/FeatureRenderer.java +++ b/src/jalview/appletgui/FeatureRenderer.java @@ -251,23 +251,24 @@ public class FeatureRenderer extends tmp = new Panel(); panel.add(tmp); - tmp.add(new Label("Name: ", Label.RIGHT)); + tmp.add(new Label(MessageManager.getString("label.name:"), Label.RIGHT)); tmp.add(name); tmp = new Panel(); panel.add(tmp); - tmp.add(new Label("Group: ", Label.RIGHT)); + tmp.add(new Label(MessageManager.getString("label.group:"), Label.RIGHT)); tmp.add(source); tmp = new Panel(); panel.add(tmp); - tmp.add(new Label("Colour: ", Label.RIGHT)); + tmp.add(new Label(MessageManager.getString("label.colour"), Label.RIGHT)); tmp.add(colourPanel); bigPanel.add(panel, BorderLayout.NORTH); panel = new Panel(); - panel.add(new Label("Description: ", Label.RIGHT)); + panel.add(new Label(MessageManager.getString("label.description:"), + Label.RIGHT)); panel.add(new ScrollPane().add(description)); if (!newFeatures) @@ -275,9 +276,11 @@ public class FeatureRenderer extends bigPanel.add(panel, BorderLayout.SOUTH); panel = new Panel(); - panel.add(new Label(" Start:", Label.RIGHT)); + panel.add(new Label(MessageManager.getString("label.start"), + Label.RIGHT)); panel.add(start); - panel.add(new Label(" End:", Label.RIGHT)); + panel.add(new Label(MessageManager.getString("label.end"), + Label.RIGHT)); panel.add(end); bigPanel.add(panel, BorderLayout.CENTER); } diff --git a/src/jalview/datamodel/AlignmentView.java b/src/jalview/datamodel/AlignmentView.java index fa72e80..9db9f38 100644 --- a/src/jalview/datamodel/AlignmentView.java +++ b/src/jalview/datamodel/AlignmentView.java @@ -277,8 +277,7 @@ public class AlignmentView if (!seqcigararray.isSeqCigarArray()) { throw new Error( - MessageManager - .getString("error.implementation_error_can_only_make_alignmnet_from_cigararray")); + "Implementation Error - can only make an alignment view from a CigarArray of sequences."); } // contigs = seqcigararray.applyDeletions(); contigs = seqcigararray.getDeletedRegions(); diff --git a/src/jalview/gui/DasSourceBrowser.java b/src/jalview/gui/DasSourceBrowser.java index b176672..e677084 100644 --- a/src/jalview/gui/DasSourceBrowser.java +++ b/src/jalview/gui/DasSourceBrowser.java @@ -448,7 +448,7 @@ public class DasSourceBrowser extends GDasSourceBrowser implements seqs.setSelected(seqsrc); JPanel panel = new JPanel(new BorderLayout()); JPanel pane12 = new JPanel(new BorderLayout()); - pane12.add(new JLabel(MessageManager.getString("label.name")), + pane12.add(new JLabel(MessageManager.getString("label.name:")), BorderLayout.CENTER); pane12.add(nametf, BorderLayout.EAST); panel.add(pane12, BorderLayout.NORTH); diff --git a/src/jalview/gui/FeatureRenderer.java b/src/jalview/gui/FeatureRenderer.java index 727c13b..426ea32 100644 --- a/src/jalview/gui/FeatureRenderer.java +++ b/src/jalview/gui/FeatureRenderer.java @@ -173,7 +173,8 @@ public class FeatureRenderer extends { panel = new JPanel(new GridLayout(4, 1)); tmp = new JPanel(); - tmp.add(new JLabel(MessageManager.getString("label.select_feature"))); + tmp.add(new JLabel(MessageManager.getString("label.select_feature") + + ":")); overlaps = new JComboBox(); for (int i = 0; i < features.length; i++) { @@ -224,12 +225,13 @@ public class FeatureRenderer extends tmp = new JPanel(); panel.add(tmp); - tmp.add(new JLabel(MessageManager.getString("label.name"), JLabel.RIGHT)); + tmp.add(new JLabel(MessageManager.getString("label.name:"), + JLabel.RIGHT)); tmp.add(name); tmp = new JPanel(); panel.add(tmp); - tmp.add(new JLabel(MessageManager.getString("label.group") + ":", + tmp.add(new JLabel(MessageManager.getString("label.group:"), JLabel.RIGHT)); tmp.add(source); @@ -248,7 +250,7 @@ public class FeatureRenderer extends bigPanel.add(panel, BorderLayout.NORTH); panel = new JPanel(); - panel.add(new JLabel(MessageManager.getString("label.description"), + panel.add(new JLabel(MessageManager.getString("label.description:"), JLabel.RIGHT)); description.setFont(JvSwingUtils.getTextAreaFont()); description.setLineWrap(true); -- 1.7.10.2