From 360043ea132ce2182da64826940aaa98c40f8910 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 15 Apr 2005 15:02:02 +0000
Subject: [PATCH] takes on methods previously in desktop

---
 src/jalview/gui/SliderPanel.java |  107 ++++++++++++++++++++++++++++++++++++++
 1 file changed, 107 insertions(+)

diff --git a/src/jalview/gui/SliderPanel.java b/src/jalview/gui/SliderPanel.java
index 253246b..2fbe0cc 100755
--- a/src/jalview/gui/SliderPanel.java
+++ b/src/jalview/gui/SliderPanel.java
@@ -5,6 +5,7 @@ import jalview.schemes.*;
 import jalview.datamodel.*;
 import java.awt.event.*;
 import javax.swing.event.*;
+import javax.swing.*;
 import java.util.*;
 
 public class SliderPanel extends GSliderPanel
@@ -13,6 +14,112 @@ public class SliderPanel extends GSliderPanel
   boolean forConservation = true;
   ColourSchemeI cs;
 
+  static JInternalFrame conservationSlider;
+  static JInternalFrame PIDSlider;
+
+  public static int setConservationSlider(AlignmentPanel ap, ColourSchemeI cs, String source)
+  {
+    SliderPanel sp = null;
+    ConservationColourScheme ccs = (ConservationColourScheme)cs;
+    int value = ccs.inc;
+
+    if(conservationSlider == null)
+    {
+      sp = new SliderPanel(ap, value, true, cs);
+      conservationSlider = new JInternalFrame();
+      conservationSlider.setContentPane(sp);
+    }
+    else
+    {
+        sp = (SliderPanel)conservationSlider.getContentPane();
+        sp.cs = cs;
+        sp.setValue(value);
+    }
+
+    conservationSlider.setTitle("Conservation Colour Increment  ("+source+")");
+    if(ap.av.alignment.getGroups()!=null)
+      sp.setAllGroupsCheckEnabled( true );
+    else
+      sp.setAllGroupsCheckEnabled( false);
+
+    return sp.getValue();
+  }
+
+  public static void showConservationSlider()
+  {
+    try{
+      PIDSlider.setClosed(true);
+      PIDSlider = null;
+    }catch(Exception ex){}
+
+
+    if(!conservationSlider.isVisible())
+    {
+      Desktop.addInternalFrame(conservationSlider, conservationSlider.getTitle(), 420, 90, false);
+      conservationSlider.addInternalFrameListener(new javax.swing.event.
+                                                  InternalFrameAdapter()
+      {
+        public void internalFrameClosed(javax.swing.event.InternalFrameEvent e)
+        {
+          conservationSlider = null;
+        }
+      });
+      conservationSlider.setLayer(JLayeredPane.PALETTE_LAYER);
+    }
+
+  }
+
+  public static int setPIDSliderSource(AlignmentPanel ap, ColourSchemeI cs, String source)
+   {
+     SliderPanel pid = null;
+     if(PIDSlider == null)
+     {
+       pid = new SliderPanel(ap, 50, false, cs);
+       PIDSlider = new JInternalFrame();
+       PIDSlider.setContentPane(pid);
+       PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
+     }
+     else
+     {
+         pid = (SliderPanel)PIDSlider.getContentPane();
+         pid.cs = cs;
+     }
+     PIDSlider.setTitle("Percentage Identity Threshold ("+source+")");
+
+     if (ap.av.alignment.getGroups() != null)
+       pid.setAllGroupsCheckEnabled(true);
+     else
+       pid.setAllGroupsCheckEnabled(false);
+
+     return pid.getValue();
+
+   }
+
+   public static void showPIDSlider()
+   {
+     try{
+       conservationSlider.setClosed(true);
+       conservationSlider = null;
+     }catch(Exception ex){}
+
+     if(!PIDSlider.isVisible())
+    {
+      Desktop.addInternalFrame(PIDSlider, PIDSlider.getTitle(), 420, 90, false);
+      PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
+      PIDSlider.addInternalFrameListener(new javax.swing.event.
+                                                  InternalFrameAdapter()
+      {
+        public void internalFrameClosed(javax.swing.event.InternalFrameEvent e)
+        {
+          PIDSlider = null;
+        }
+      });
+      PIDSlider.setLayer(JLayeredPane.PALETTE_LAYER);
+    }
+
+   }
+
+
   public SliderPanel(AlignmentPanel ap, int value, boolean forConserve, ColourSchemeI cs)
   {
     this.ap = ap;
-- 
1.7.10.2