From 3899cb96ea4eeb4f528f801a87b28f5b1b453106 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Tue, 14 Jun 2016 12:26:04 +0100
Subject: [PATCH] JAL-2110 ensure "UniProtKB/Swiss-Prot" dbrefs canonicalised
 to UNIPROT

---
 src/jalview/datamodel/xdb/embl/EmblEntry.java |    1 +
 1 file changed, 1 insertion(+)

diff --git a/src/jalview/datamodel/xdb/embl/EmblEntry.java b/src/jalview/datamodel/xdb/embl/EmblEntry.java
index a0e1234..eb49711 100644
--- a/src/jalview/datamodel/xdb/embl/EmblEntry.java
+++ b/src/jalview/datamodel/xdb/embl/EmblEntry.java
@@ -200,6 +200,7 @@ public class EmblEntry
     {
       for (DBRefEntry dbref : dbRefs)
       {
+        dbref.setSource(DBRefUtils.getCanonicalName(dbref.getSource()));
         dna.addDBRef(dbref);
       }
     }
-- 
1.7.10.2