From 3c7a633b4868a7a95ed1cfe19be6dd44c22ac473 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 8 May 2007 10:44:13 +0000
Subject: [PATCH] must specify .CA

---
 src/jalview/appletgui/AppletJmol.java |    2 +-
 src/jalview/gui/AppJmol.java          |    3 ++-
 2 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/src/jalview/appletgui/AppletJmol.java b/src/jalview/appletgui/AppletJmol.java
index 45243b0..6e2047b 100644
--- a/src/jalview/appletgui/AppletJmol.java
+++ b/src/jalview/appletgui/AppletJmol.java
@@ -724,7 +724,7 @@ public class AppletJmol extends Frame
       picked+=strInfo.substring(strInfo.indexOf(":")+1,
                                strInfo.indexOf("."));
 
-    picked+=".C";
+    picked+=".CA";
 
     if (!atomsPicked.contains(picked))
     {
diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index 7aa0183..ab03d10 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -843,7 +843,8 @@ public synchronized void addSequence(SequenceI [] seq)
     if (chainId != null)
       picked+=(":"+chainId.substring(1, chainId.length()));
 
-    picked+=".C";
+    picked+=".CA";
+
 
     if (!atomsPicked.contains(picked))
     {
-- 
1.7.10.2