From 4075dfe2006ce1d5e819347f0955de96304be0bf Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Wed, 25 Sep 2013 23:17:29 +0000 Subject: [PATCH] Deleted wiki page Archaeopteryx through web user interface. --- wiki/Archaeopteryx.wiki | 35 ----------------------------------- 1 file changed, 35 deletions(-) delete mode 100644 wiki/Archaeopteryx.wiki diff --git a/wiki/Archaeopteryx.wiki b/wiki/Archaeopteryx.wiki deleted file mode 100644 index 99c6588..0000000 --- a/wiki/Archaeopteryx.wiki +++ /dev/null @@ -1,35 +0,0 @@ -#summary Archaeopteryx Documentation - -= Archaeopteryx Documentation = - - -= Introduction = - -Under development! - -Documentation, tutorial, and examples for visualization, analysis, and editing of phylogenetic trees with [https://sites.google.com/site/cmzmasek/home/software/archaeopteryx/ Archaeopteryx]. -Some (older) documentation can also be found [http://aptxevo.wordpress.com/ here]. - -For developers: Information on the underlying [https://sites.google.com/site/cmzmasek/home/software/forester/ forester] framework is available [forester here]. - -Author: [https://sites.google.com/site/cmzmasek/ Christian Zmasek], Sanford-Burnham Medical Research Institute - - - -Copyright (C) 2012 Christian M Zmasek. All rights reserved. - ----- - -= Frequently Asked Questions = - -== How to read and display vector or expression data == - -Aptx can be used to display vector or expression data associated with tree nodes: - - # Ensure the configuration file contains this line: "show_vector_data: display yes" - # Start Aptx and read in a tree ([http://forester.googlecode.com/files/apaf.xml example tree]) - # Open "Tools" menu and select "read Vector/Expression Values" to read in a matrix (of, for example, expression values) ([http://forester.googlecode.com/files/apaf_expression.tab example expression values]) - -It is also possible to store vector data in phyloXML formatted files ([http://forester.googlecode.com/files/apaf_with_vector_data.xml example]). - ----- \ No newline at end of file -- 1.7.10.2