From 438f101f56c8bcfe5422a54328d7bad60e9c07eb Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 16 Aug 2017 20:16:52 +0100
Subject: [PATCH] JAL-2418 reclassify some issues to features/bugs resolved

---
 help/html/releases.html |   18 +++++++++---------
 1 file changed, 9 insertions(+), 9 deletions(-)

diff --git a/help/html/releases.html b/help/html/releases.html
index b564428..471e12a 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -122,10 +122,6 @@ li:before {
               with alignment and overview windows
             </li>
             <li>
-              <!--  JAL-2491 -->Linked scrolling of CDS/Protein views
-              via Overview or sequence motif search operations
-            </li>
-            <li>
               <!-- JAL-2514 -->Scrolling of wrapped alignment views via
               overview
             </li>
@@ -167,6 +163,10 @@ li:before {
               the application.
             </li>
             <li>
+              <!--  JAL-2491 -->Linked scrolling of CDS/Protein views
+              via Overview or sequence motif search operations
+            </li>
+            <li>
               <!-- JAL-2547 -->Amend sequence features dialog box can be
               opened by double clicking gaps within sequence feature
               extent
@@ -180,6 +180,10 @@ li:before {
           <em>3D Structure</em>
           <ul>
             <li>
+              <!-- JAL-2430 -->Hidden regions in alignment views are not
+              coloured in linked structure views
+            </li>
+            <li>
               <!-- JAL-1596 -->Faster Chimera/Jalview communication by
               file-based command exchange
             </li>
@@ -268,7 +272,7 @@ li:before {
               matrix - C->R should be '-3'<br />Old matrix restored
               with this one-line groovy script:<br />jalview.analysis.scoremodels.ScoreModels.instance.BLOSUM62.@matrix[4][1]=3
             </li>
-            <li>
+            <li><a name="2102scoremodelbugs"/>
               <!-- JAL-2397 -->Fixed Jalview's treatment of gaps in PCA
               and substitution matrix based Tree calculations.<br /> <br />In
               earlier versions of Jalview, gaps matching gaps were
@@ -418,10 +422,6 @@ li:before {
           <em>Rendering</em>
           <ul>
             <li>
-              <!-- JAL-2430 -->Hidden regions in alignment views are not
-              coloured in linked structure views
-            </li>
-            <li>
               <!-- JAL-2421 -->Overview window visible region moves
               erratically when hidden rows or columns are present
             </li>
-- 
1.7.10.2