From 48e022d36722b4af447dcdadfded6c00586186d2 Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@compbio.dundee.ac.uk>
Date: Mon, 21 Oct 2013 17:52:51 +0100
Subject: [PATCH] JAL-1400 Always create indices for jar before signing

---
 build.xml |    4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/build.xml b/build.xml
index 95c855a..b208c8e 100755
--- a/build.xml
+++ b/build.xml
@@ -412,7 +412,7 @@
 				<include name="*.jar"/>
 			</fileset>
 		</delete>
-		<jar destfile="${packageDir}/${outputJar}">
+		<jar destfile="${packageDir}/${outputJar}" index="true">
 			<manifest>
 				<attribute name="Main-Class" value="jalview.bin.Jalview" />
         <attribute name="Permissions" value="all-permissions" />
@@ -464,7 +464,7 @@
 	<target name="packageApplet" depends="compileApplet, buildPropertiesFile">
 		<copy file="${resourceDir}/images/idwidth.gif" toFile="${outputDir}/images/idwidth.gif" />
 		<copy file="${resourceDir}/images/link.gif" toFile="${outputDir}/images/link.gif" />
-		<jar destfile="in.jar">
+		<jar destfile="in.jar" index="true">
 			<manifest>
 				<attribute name="Main-Class" value="jalview.bin.JalviewLite" />
 			  <!--				<attribute name="Permissions" value="sandbox" /> -->
-- 
1.7.10.2