From 4c46bbeeb645f914293383092f8c6bf022a870e4 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Wed, 15 Oct 2014 10:16:10 +0100 Subject: [PATCH] JAL-674 always try to extract secondary structure when importing a PDB file --- src/jalview/io/AppletFormatAdapter.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/jalview/io/AppletFormatAdapter.java b/src/jalview/io/AppletFormatAdapter.java index ed49d5e..5366cb4 100755 --- a/src/jalview/io/AppletFormatAdapter.java +++ b/src/jalview/io/AppletFormatAdapter.java @@ -236,7 +236,7 @@ public class AppletFormatAdapter } else if (format.equals("PDB")) { - afile = new MCview.PDBfile(inFile, type); + afile = new MCview.PDBfile(true,true,inFile, type); // Uncomment to test Jmol data based PDB processing: JAL-1213 // afile = new jalview.ext.jmol.PDBFileWithJmol(inFile, type); } @@ -357,7 +357,7 @@ public class AppletFormatAdapter } else if (format.equals("PDB")) { - afile = new MCview.PDBfile(source); + afile = new MCview.PDBfile(true,true,source); } else if (format.equals("STH")) { -- 1.7.10.2