From 539ad6934aecb2472bb42385cc9aeae18a19011b Mon Sep 17 00:00:00 2001 From: James Procter Date: Thu, 21 Sep 2023 17:20:27 +0100 Subject: [PATCH] JAL-3855 disable the AlphaFold DB entry in Sequence Fetcher - see JAL-4287 for an alternative (and perhaps preferred way) of fetching proteins with alphafold structures. --- src/jalview/ws/SequenceFetcher.java | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index 518e7c6..4c22f11 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -62,7 +62,9 @@ public class SequenceFetcher extends ASequenceFetcher addDBRefSourceImpl(PfamFull.class); addDBRefSourceImpl(PfamSeed.class); addDBRefSourceImpl(RfamSeed.class); - addDBRefSourceImpl(EBIAlfaFold.class); + // Technically not a database cross reference we fetch directly + // Useful for AlphaFold debugging + // addDBRefSourceImpl(EBIAlfaFold.class); } /** -- 1.7.10.2