From 5d42680ece60840a7c5851b169e94bd091fff1d8 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 28 Apr 2006 16:38:33 +0000
Subject: [PATCH] Make sure end is less than sequence width

---
 src/jalview/datamodel/Sequence.java |    2 ++
 1 file changed, 2 insertions(+)

diff --git a/src/jalview/datamodel/Sequence.java b/src/jalview/datamodel/Sequence.java
index a960adf..333737e 100755
--- a/src/jalview/datamodel/Sequence.java
+++ b/src/jalview/datamodel/Sequence.java
@@ -643,6 +643,8 @@ public class Sequence implements SequenceI
     {
       StringBuffer newSeq = new StringBuffer();
 
+      if(end>=sequence.length())
+        end = sequence.length()-1;
 
       if (start > 0)
       {
-- 
1.7.10.2