From 5f0327b9a1f7adedb23e9188aef61e98dd14a1c2 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 15 Dec 2004 17:17:51 +0000
Subject: [PATCH] Right mouse brings up Popupmenu

---
 src/jalview/gui/IdPanel.java |   60 +++++++++++++-----------------------------
 1 file changed, 18 insertions(+), 42 deletions(-)

diff --git a/src/jalview/gui/IdPanel.java b/src/jalview/gui/IdPanel.java
index 644d2ce..ff175aa 100755
--- a/src/jalview/gui/IdPanel.java
+++ b/src/jalview/gui/IdPanel.java
@@ -33,7 +33,8 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
   public void mouseMoved(MouseEvent e) {}
 
   public void selectSeqs(int start, int end) {
-     if (end < start) {
+     if (end < start)
+     {
        int tmp = start;
        start = end;
        end   = tmp;
@@ -74,9 +75,6 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
     int y = e.getY();
     int seq = av.getIndex(y);
 
-
-
-
     if (seq < lastid)
       selectSeqs(lastid - 1, seq);
     else if (seq > lastid)
@@ -112,50 +110,28 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
     int y = e.getY();
     int seq = av.getIndex(y);
 
+    selectedSequenceGroup = av.getRubberbandGroup();
+    if (selectedSequenceGroup == null)
+    {
+      selectedSequenceGroup = new SequenceGroup();
+      av.setRubberbandGroup(selectedSequenceGroup);
+    }
 
-      if( javax.swing.SwingUtilities.isRightMouseButton(e))
-      {
-        jalview.gui.PopupMenu pop = new jalview.gui.PopupMenu( av , alignPanel.seqPanel);
-        pop.show(this, e.getX(), y);
-
-
-  /*      String id = av.getAlignment().getSequenceAt(seq).getName();
-        String s = (String)JOptionPane.showInternalInputDialog(
-                    this,
-                    "Edit sequence name",
-                    "Edit sequence name",
-                    JOptionPane.PLAIN_MESSAGE,
-                    null,
-                    null,
-                    id);
-
-        if(s!=null)
-        {
-          av.getAlignment().getSequenceAt(seq).setName(s);
-          alignPanel.RefreshPanels();
-        }*/
-
-      }
-      else
-      {
+    selectedSequenceGroup.setStartRes(0);
+    selectedSequenceGroup.setEndRes(av.getAlignment().getWidth() - 1);
 
-        selectedSequenceGroup = av.getRubberbandGroup();
-        if(selectedSequenceGroup==null)
-        {
-          selectedSequenceGroup = new SequenceGroup();
-          av.setRubberbandGroup(selectedSequenceGroup);
-        }
+    if (seq != -1)
+      selectSeqs(seq, seq);
 
-        selectedSequenceGroup.setStartRes(0);
-        selectedSequenceGroup.setEndRes( av.getAlignment().getWidth()-1 );
+    lastid = seq;
 
-       // selectedSequenceGroup = av.alignment.findGroup(seq);
+    if( javax.swing.SwingUtilities.isRightMouseButton(e))
+     {
+       jalview.gui.PopupMenu pop = new jalview.gui.PopupMenu(alignPanel, av.getAlignment().getSequenceAt(seq) );
+       pop.show(this, e.getX(), y);
+     }
 
-        if (seq != -1)
-          selectSeqs(seq,seq);
 
-        lastid = seq;
-      }
     return;
   }
 
-- 
1.7.10.2