From 6386a2fdc5000b7fda564cb58a99567c81a2607e Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 30 Sep 2005 17:18:41 +0000
Subject: [PATCH] Remove redundancy from Eclipse

---
 src/MCview/PDBChain.java  |    6 +++---
 src/MCview/PDBfile.java   |   10 ----------
 src/MCview/rotCanvas.java |   10 +++++-----
 3 files changed, 8 insertions(+), 18 deletions(-)

diff --git a/src/MCview/PDBChain.java b/src/MCview/PDBChain.java
index 4bfe255..192156e 100755
--- a/src/MCview/PDBChain.java
+++ b/src/MCview/PDBChain.java
@@ -93,7 +93,7 @@ public class PDBChain {
 
         for (int i = 0; i < atoms.size(); i++) {
             myAtom tmp = (myAtom) atoms.elementAt(i);
-            String resName = tmp.resName;
+            //String resName = tmp.resName;
             int resNumber = tmp.resNumber;
             int res = resNumber;
 
@@ -162,7 +162,7 @@ public class PDBChain {
                 } else if (b.at1.resName.toUpperCase().equals("CYS")) {
                     b.startCol = Color.yellow;
                 } else {
-                    int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at1.resName.toUpperCase())).intValue();
+                    //int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at1.resName.toUpperCase())).intValue();
                     b.startCol = Color.lightGray;
                 }
 
@@ -175,7 +175,7 @@ public class PDBChain {
                 } else if (b.at2.resName.toUpperCase().equals("CYS")) {
                     b.endCol = Color.yellow;
                 } else {
-                    int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at2.resName.toUpperCase())).intValue();
+                    //int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at2.resName.toUpperCase())).intValue();
                     b.endCol = Color.lightGray;
                 }
             } catch (Exception e) {
diff --git a/src/MCview/PDBfile.java b/src/MCview/PDBfile.java
index 71d8c11..f97216b 100755
--- a/src/MCview/PDBfile.java
+++ b/src/MCview/PDBfile.java
@@ -152,14 +152,4 @@ public class PDBfile extends jalview.io.FileParse {
             ((PDBChain) chains.elementAt(i)).setChainColours();
         }
     }
-
-    public static void main(String[] args) {
-        try {
-            PDBfile pdb = new PDBfile("enkp1.pdb", "File");
-        } catch (IOException e) {
-            System.out.println(e);
-            e.printStackTrace();
-            System.exit(0);
-        }
-    }
 }
diff --git a/src/MCview/rotCanvas.java b/src/MCview/rotCanvas.java
index bab7624..be14db8 100755
--- a/src/MCview/rotCanvas.java
+++ b/src/MCview/rotCanvas.java
@@ -606,12 +606,12 @@ public class rotCanvas extends JPanel implements KeyListener, MouseListener,
     }
 
     public void mouseReleased(MouseEvent evt) {
-        int x = evt.getX();
-        int y = evt.getY();
+        //int x = evt.getX();
+        //int y = evt.getY();
 
-        if (!dragging) {
-            myAtom tmp = findAtom(x, y);
-        }
+        //if (!dragging) {
+          //  myAtom tmp = findAtom(x, y);
+        //}
 
         drawLabels();
 
-- 
1.7.10.2