From 645c2b050820af4a0cefd91ccb1db62bccb084c2 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 16 Mar 2006 15:17:14 +0000
Subject: [PATCH] Check endres when drawing graphs

---
 src/jalview/appletgui/AnnotationPanel.java |   16 +++++++++-------
 1 file changed, 9 insertions(+), 7 deletions(-)

diff --git a/src/jalview/appletgui/AnnotationPanel.java b/src/jalview/appletgui/AnnotationPanel.java
index 4bc8ed5..92ee3a2 100755
--- a/src/jalview/appletgui/AnnotationPanel.java
+++ b/src/jalview/appletgui/AnnotationPanel.java
@@ -556,6 +556,9 @@ public class AnnotationPanel
     if(sRes>aa.annotations.length)
       return;
 
+
+    eRes = Math.min(eRes, aa.annotations.length);
+
     int x = 0;
 
     //Adjustment for fastpaint to left
@@ -576,17 +579,16 @@ public class AnnotationPanel
       y2 = (int)(y - (0-min / range)*graphHeight);
 
     g.setColor(Color.gray);
-    g.drawLine(x-av.charWidth,y2,(eRes-sRes+1)*av.charWidth,y2);
+    g.drawLine(x-av.charWidth,y2,(eRes-sRes)*av.charWidth,y2);
 
 
     if(aa.threshold!=null)
     {
         g.setColor(aa.threshold.colour);
         y2 = (int)(y - ((aa.threshold.value-min) / range)*graphHeight);
-        g.drawLine(x-av.charWidth,y2,(eRes-sRes+1)*av.charWidth,y2);
+        g.drawLine(x-av.charWidth,y2,(eRes-sRes)*av.charWidth,y2);
     }
 
-    eRes = Math.min(eRes, aa.annotations.length);
     for (int j = sRes; j < eRes; j++)
     {
       if(aa.annotations[j]==null || aa.annotations[j-1]==null)
@@ -610,6 +612,9 @@ public class AnnotationPanel
     if(sRes>aa.annotations.length)
       return;
 
+
+    eRes = Math.min(eRes, aa.annotations.length);
+
     int x=0, y1, y2;
 
     float range = max - min;
@@ -618,7 +623,7 @@ public class AnnotationPanel
     {
         g.setColor(aa.threshold.colour);
         y2 = (int)(y - ((aa.threshold.value-min) / range)*aa.graphHeight);
-        g.drawLine(x-av.charWidth,y2,(eRes-sRes+1)*av.charWidth,y2);
+        g.drawLine(x-av.charWidth,y2,(eRes-sRes)*av.charWidth,y2);
     }
 
     y1 = y2 = y;
@@ -630,9 +635,6 @@ public class AnnotationPanel
 
     g.drawLine(x,y2,(eRes-sRes+1)*av.charWidth,y2);
 
-    eRes = Math.min(eRes, aa.annotations.length-1);
-
-
     for (int j = sRes; j < eRes; j++)
     {
 
-- 
1.7.10.2