From 68cc1db37c5222f4f5ef26289313387559ed4c37 Mon Sep 17 00:00:00 2001
From: jprocter <Jim Procter>
Date: Wed, 7 Jan 2009 14:30:07 +0000
Subject: [PATCH] check for features on the retrieved sequences

---
 src/jalview/gui/SequenceFetcher.java |   14 +++++++++++++-
 1 file changed, 13 insertions(+), 1 deletion(-)

diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java
index 2ecdc89..64d88af 100755
--- a/src/jalview/gui/SequenceFetcher.java
+++ b/src/jalview/gui/SequenceFetcher.java
@@ -664,7 +664,19 @@ public class SequenceFetcher extends JPanel implements Runnable
         {
           title = "Retrieved from " + database.getSelectedItem();
         }
-
+        SequenceFeature[] sfs=null;
+        for (Enumeration sq=al.getSequences().elements(); sq.hasMoreElements();)
+        {
+          if ((sfs=((SequenceI)sq.nextElement()).getDatasetSequence().getSequenceFeatures())!=null)
+          {
+            if (sfs.length>0)
+            {
+              af.setShowSeqFeatures(true);
+              break;
+            }
+          }
+          
+        }
         Desktop.addInternalFrame(af, title, AlignFrame.DEFAULT_WIDTH,
                 AlignFrame.DEFAULT_HEIGHT);
 
-- 
1.7.10.2