From 6a2c35d5cde338e1eb9ee851f2a5a7a00ddee819 Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 17 Dec 2018 15:59:32 +0000
Subject: [PATCH] JAL-3174 backout un-needed stacktrace for exception raised
 during testing (since we expect it)

---
 test/jalview/ext/htsjdk/TestHtsContigDb.java |    6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/test/jalview/ext/htsjdk/TestHtsContigDb.java b/test/jalview/ext/htsjdk/TestHtsContigDb.java
index ad9bf03..69634a9 100644
--- a/test/jalview/ext/htsjdk/TestHtsContigDb.java
+++ b/test/jalview/ext/htsjdk/TestHtsContigDb.java
@@ -103,10 +103,8 @@ public class TestHtsContigDb
       fail("Expected exception");
     } catch (IOException e)
     {
-      System.out.println(
-              "Caught IOException in testCreateFastaSequenceIndex");
-      e.printStackTrace();
-      // expected
+      // we expect an IO Exception because the pgmB.fasta.fai exists, since it
+      // was checked it in.
     }
 
     /*
-- 
1.7.10.2