From 6af5ebe6f1879c7b705a42dab3bd51857e4e30b2 Mon Sep 17 00:00:00 2001
From: jprocter <Jim Procter>
Date: Wed, 24 Oct 2007 14:05:37 +0000
Subject: [PATCH] individual query error/exception report and bugfix

---
 src/jalview/ws/ASequenceFetcher.java |   16 ++++++++++++----
 1 file changed, 12 insertions(+), 4 deletions(-)

diff --git a/src/jalview/ws/ASequenceFetcher.java b/src/jalview/ws/ASequenceFetcher.java
index 1e1f6f8..9605ad0 100644
--- a/src/jalview/ws/ASequenceFetcher.java
+++ b/src/jalview/ws/ASequenceFetcher.java
@@ -104,9 +104,17 @@ public class ASequenceFetcher
               qsb.append(fetcher.getAccessionSeparator());
             }
           } while (doMultiple && qs.hasMoreElements());
-
-          // create a fetcher and go to it
-          AlignmentI seqset = fetcher.getSequenceRecords(qsb.toString());
+          
+          AlignmentI seqset=null;
+          try {
+            // create a fetcher and go to it
+            seqset = fetcher.getSequenceRecords(qsb.toString());
+          } catch (Exception ex)
+          {
+            System.err.println("Failed to retrieve the following from "+db);
+            System.err.println(qsb);
+            ex.printStackTrace(System.err);
+          }
           // TODO: Merge alignment together - perhaps
           if (seqset != null)
           {
@@ -153,7 +161,7 @@ public class ASequenceFetcher
         int n = 0;
         while (qv.hasMoreElements())
         {
-          System.err.print(" " + qv + ";");
+          System.err.print(" " + qv.nextElement() + ";");
           if (n++ > 10)
           {
             System.err.println();
-- 
1.7.10.2