From 6f6f5dd035df25f971ab1191c76bb3bae337e950 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Tue, 9 Dec 2014 12:21:20 +0000
Subject: [PATCH] JAL-1616 loading of datasets from XML patched

---
 src/jalview/gui/Jalview2XML.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/gui/Jalview2XML.java b/src/jalview/gui/Jalview2XML.java
index d003cb0..cccf34d 100644
--- a/src/jalview/gui/Jalview2XML.java
+++ b/src/jalview/gui/Jalview2XML.java
@@ -4014,7 +4014,7 @@ public class Jalview2XML
       addDatasetRef(vamsasSet.getDatasetId(), ds);
     }
     // set the dataset for the newly imported alignment.
-    if (al.getDataset() == null)
+    if (al.getDataset() == null && !ignoreUnrefed)
     {
       al.setDataset(ds);
     }
-- 
1.7.10.2