From 7b5010ef9c87b8af5e4e51aba5fba47c5aa43c9a Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 17 Nov 2005 15:17:40 +0000
Subject: [PATCH] Hide vamsas settings for build

---
 src/jalview/jbgui/GAlignFrame.java |   42 +++++-------------------------------
 src/jalview/jbgui/GDesktop.java    |    1 +
 2 files changed, 6 insertions(+), 37 deletions(-)

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index 2909727..f7b1342 100755
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -115,7 +115,7 @@ public class GAlignFrame
   protected ButtonGroup colours = new ButtonGroup();
   JMenuItem vamsasStore = new JMenuItem();
   protected JCheckBoxMenuItem showTranslation = new JCheckBoxMenuItem();
-  protected JTabbedPane tabbedPane = new JTabbedPane();
+  //protected JTabbedPane tabbedPane = new JTabbedPane();
   public JMenuItem featureSettings = new JMenuItem();
   public JCheckBoxMenuItem seqDBRef = new JCheckBoxMenuItem();
   JMenuItem fetchSequence = new JMenuItem();
@@ -477,21 +477,6 @@ public class GAlignFrame
     });
     this.getContentPane().setLayout(borderLayout1);
     alignFrameMenuBar.setFont(new java.awt.Font("Verdana", 0, 11));
-    alignFrameMenuBar.addAncestorListener(new AncestorListener()
-    {
-      public void ancestorAdded(AncestorEvent event)
-      {
-        alignFrameMenuBar_ancestorAdded(event);
-      }
-
-      public void ancestorRemoved(AncestorEvent event)
-      {
-      }
-
-      public void ancestorMoved(AncestorEvent event)
-      {
-      }
-    });
     statusBar.setBackground(Color.white);
     statusBar.setFont(new java.awt.Font("Verdana", 0, 11));
     statusBar.setBorder(BorderFactory.createLineBorder(Color.black));
@@ -913,6 +898,7 @@ public class GAlignFrame
         padGapsMenuitem_actionPerformed(e);
       }
     });
+    vamsasStore.setVisible(false);
     vamsasStore.setText("VAMSAS store");
     vamsasStore.addActionListener(new ActionListener()
     {
@@ -930,14 +916,14 @@ public class GAlignFrame
       }
     });
 
-    tabbedPane.addChangeListener(new ChangeListener()
+   /* tabbedPane.addChangeListener(new ChangeListener()
         {
           public void stateChanged(ChangeEvent ece)
           {
 
             tabSelected();
           }
-        });
+        });*/
     featureSettings.setEnabled(false);
     featureSettings.setText("Feature Settings...");
     featureSettings.addActionListener(new ActionListener()
@@ -1049,7 +1035,7 @@ public class GAlignFrame
     webServiceNoServices=new JMenuItem("<No Services>");
     webService.add(webServiceNoServices);
     this.getContentPane().add(statusBar, BorderLayout.SOUTH);
-    this.getContentPane().add(tabbedPane, java.awt.BorderLayout.CENTER);
+  //  this.getContentPane().add(tabbedPane, java.awt.BorderLayout.CENTER);
     jMenu1.add(pasteNew);
     jMenu1.add(pasteThis);
     sort.add(sortIDMenuItem);
@@ -1176,10 +1162,6 @@ public class GAlignFrame
   {
   }
 
-  protected void clustalAlignMenuItem_actionPerformed(ActionEvent e)
-  {
-  }
-
   protected void clustalColour_actionPerformed(ActionEvent e)
   {
   }
@@ -1334,17 +1316,7 @@ public class GAlignFrame
   {
   }
 
-  protected void preferences_actionPerformed(ActionEvent e)
-  {
-  }
-
-  protected void msaAlignMenuItem_actionPerformed(ActionEvent e)
-  {
-  }
 
-  protected void alignFrameMenuBar_ancestorAdded(AncestorEvent event)
-  {
-  }
 
   protected void saveAlignmentMenu_actionPerformed(ActionEvent e)
   {
@@ -1354,9 +1326,6 @@ public class GAlignFrame
   {
   }
 
-  protected void ClustalRealign_actionPerformed(ActionEvent e)
-  {
-  }
 
   public void vamsasStore_actionPerformed(ActionEvent e)
   {
@@ -1387,5 +1356,4 @@ public class GAlignFrame
   {
 
   }
-
 }
diff --git a/src/jalview/jbgui/GDesktop.java b/src/jalview/jbgui/GDesktop.java
index 335fcb8..81a6fea 100755
--- a/src/jalview/jbgui/GDesktop.java
+++ b/src/jalview/jbgui/GDesktop.java
@@ -161,6 +161,7 @@ public class GDesktop extends JFrame
         jMenu1.setMnemonic('I');
         jMenu1.setText("Input Alignment");
     vamsasLoad.setText("Vamsas");
+    vamsasLoad.setVisible(false);
     vamsasLoad.addActionListener(new ActionListener()
     {
       public void actionPerformed(ActionEvent e)
-- 
1.7.10.2