From 82159a6825376e61f388feffdf182eed4e0e30f2 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 6 Dec 2005 18:07:33 +0000
Subject: [PATCH] View menu added to TOC

---
 help/help.jhm    |    1 +
 help/helpTOC.xml |   12 +++++-------
 2 files changed, 6 insertions(+), 7 deletions(-)

diff --git a/help/help.jhm b/help/help.jhm
index a4870c8..ed877d8 100755
--- a/help/help.jhm
+++ b/help/help.jhm
@@ -48,6 +48,7 @@
    <mapID target="alMenu" url="html/menus/alignmentMenu.html"/>
    <mapID target="alwFile" url="html/menus/alwfile.html"/>
    <mapID target="alwEdit" url="html/menus/alwedit.html"/>
+   <mapID target="alwView" url="html/menus/alwview.html"/>
    <mapID target="alwColour" url="html/menus/alwcolour.html"/>
    <mapID target="alwCalc" url="html/menus/alwcalculate.html"/>
    
diff --git a/help/helpTOC.xml b/help/helpTOC.xml
index 5c48b5a..6a8fe72 100755
--- a/help/helpTOC.xml
+++ b/help/helpTOC.xml
@@ -2,13 +2,9 @@
 <!DOCTYPE toc PUBLIC "-//Sun Microsystems Inc.//DTD JavaHelp TOC Version 1.0//EN" "http://java.sun.com/products/javahelp/toc_1_0.dtd">
 <toc version="1.0">
 <tocitem text="Jalview Documentation" target="home" expand="true" >
-	<tocitem text="What's new" target="new" expand="false">
-		<tocitem text="Search" target="search"/>
-		<tocitem text="Wrap Alignment" target="wrap"/>
-		<tocitem text="Overview Window" target ="overview"/>
-		<tocitem text="Sequence Features" target ="seqfeatures"/>
-      		<tocitem text="Alignment Annotations" target ="alannotation"/>
-	</tocitem>
+	<tocitem text="What's new" target="new" expand="false"/>
+      	<tocitem text="Alignment Annotations" target ="alannotation"/>
+	
 	<tocitem text="Input / Output" target="io"/>
   	<tocitem text="Making figures" target="export"/>
 	<tocitem text="Editing Alignments" target ="edit"/>
@@ -45,6 +41,8 @@
 		<tocitem text="Alignment Window" target="alMenu">
                 <tocitem text="File Menu" target="alwFile"/>
                 <tocitem text="Edit Menu" target="alwEdit"/>  
+                <tocitem text="Search Menu" target="search"/> 
+                <tocitem text="View Menu" target="alwView"/>  
                 <tocitem text="Colour Menu" target="alwColour"/>
                 <tocitem text="Calculation Menu" target="alwCalc"/>
 				<tocitem text="Web Service Menu" target="wsMenu"/>
-- 
1.7.10.2