From 8bb6d4ca134e9b72bfd44aff6a51c6b14185a69d Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Mon, 5 Feb 2007 16:11:52 +0000
Subject: [PATCH] Alignment editing columns 0 and 1 fixed

---
 src/jalview/commands/EditCommand.java |    9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

diff --git a/src/jalview/commands/EditCommand.java b/src/jalview/commands/EditCommand.java
index 1d4880a..d9f51e0 100644
--- a/src/jalview/commands/EditCommand.java
+++ b/src/jalview/commands/EditCommand.java
@@ -378,14 +378,17 @@ public class EditCommand implements CommandI
             if(command.position+command.number>aSize)
               tSize = aSize;
             else
-            tSize = aSize - command.number + command.position;
+             {
+                tSize = aSize - command.number + command.position;
+             }
           }
           else
             tSize = aSize;
 
           if(tSize<0)
+          {
             tSize = aSize;
-
+          }
           temp = new Annotation[tSize];
 
         }
@@ -439,7 +442,7 @@ public class EditCommand implements CommandI
         }
         else
         {
-          if(tSize!=aSize)
+          if(tSize!=aSize || command.position<2)
           {
             System.arraycopy(annotations[a].annotations,
                              0, temp, 0, command.position);
-- 
1.7.10.2