From 8cea0d75ef3231f205ae4fe07d7c7dd5551b01d6 Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@issues.jalview.org>
Date: Mon, 2 May 2016 12:19:54 +0100
Subject: [PATCH] JAL-2089 JAL-1551 formatting

---
 help/html/releases.html |   88 +++++++++++++++++++++++++++++------------------
 1 file changed, 55 insertions(+), 33 deletions(-)

diff --git a/help/html/releases.html b/help/html/releases.html
index dc402c4..0bb5fb7 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -108,45 +108,63 @@
             <em>8/10/2015</em></strong>
         </div>
       </td>
-      <td>
-      <em>General</em>
+      <td><em>General</em>
+        <ul>
+          <li>Updated Spanish translations of localized text for
+            2.9</li>
+        </ul> <em>Application</em>
       <ul>
-            <li>Updated Spanish translations of localized text for 2.9</li>
-      </ul>
-      <em>Application</em><ul>
-      <!-- <li>cDNA/Protein splitframe window geometry preserved in Jalview projects</li>-->
-      <li>Signed OSX InstallAnywhere installer<br></li>
-      <li>Support for per-sequence based annotations in BioJSON</li></ul>
-        <em>Applet</em>
-        <ul><li>Split frame example added to applet examples page</li>
-            </ul>
-      </td>
+          <!-- <li>cDNA/Protein splitframe window geometry preserved in Jalview projects</li>-->
+          <li>Signed OSX InstallAnywhere installer<br></li>
+          <li>Support for per-sequence based annotations in BioJSON</li>
+        </ul> <em>Applet</em>
+        <ul>
+          <li>Split frame example added to applet examples page</li>
+        </ul></td>
       <td>
         <div align="left">
-        <em>General</em>
+          <em>General</em>
           <ul>
-            <li>Mapping of cDNA to protein in split frames incorrect when sequence start > 1</li>
-            <li>Broken images in filter column by annotation dialog documentation</li>
+            <li>Mapping of cDNA to protein in split frames
+              incorrect when sequence start > 1</li>
+            <li>Broken images in filter column by annotation dialog
+              documentation</li>
             <li>Feature colours not parsed from features file</li>
-            <li>Exceptions and incomplete link URLs recovered when loading a features file containing HTML tags in feature description</li>
-            
+            <li>Exceptions and incomplete link URLs recovered when
+              loading a features file containing HTML tags in feature
+              description</li>
+
           </ul>
-      <em>Application</em><ul>
-            <li>Annotations corrupted after BioJS export and reimport</li>
-            <li>Incorrect sequence limits after Fetch DB References with 'trim retrieved sequences'</li>
-            <li>Incorrect warning about deleting all data when deleting selected columns</li>
-            <li>Patch to build system for shipping properly signed JNLP templates for webstart launch</li>
-            <li>EMBL-PDBe fetcher/viewer dialogs do not offer unreleased structures for download or viewing</li>
-            <li>Tab/space/return keystroke operation of EMBL-PDBe fetcher/viewer dialogs works correctly</li>
-            <li>Disabled 'minimise' button on Jalview windows running on OSX to workaround redraw hang bug</li>
-            <li>Split cDNA/Protein view position and geometry not recovered from jalview project</li>
-            <li>Initial enabled/disabled state of annotation menu sorter 'show autocalculated first/last' corresponds to alignment view</li>
-            <li>Restoring of Clustal, RNA Helices and T-Coffee color schemes from BioJSON</li>
-            </ul>
-      <em>Applet</em><ul>
-            <li>Reorder sequences mirrored in cDNA/Protein split frame</li>
+          <em>Application</em>
+          <ul>
+            <li>Annotations corrupted after BioJS export and
+              reimport</li>
+            <li>Incorrect sequence limits after Fetch DB References
+              with 'trim retrieved sequences'</li>
+            <li>Incorrect warning about deleting all data when
+              deleting selected columns</li>
+            <li>Patch to build system for shipping properly signed
+              JNLP templates for webstart launch</li>
+            <li>EMBL-PDBe fetcher/viewer dialogs do not offer
+              unreleased structures for download or viewing</li>
+            <li>Tab/space/return keystroke operation of EMBL-PDBe
+              fetcher/viewer dialogs works correctly</li>
+            <li>Disabled 'minimise' button on Jalview windows
+              running on OSX to workaround redraw hang bug</li>
+            <li>Split cDNA/Protein view position and geometry not
+              recovered from jalview project</li>
+            <li>Initial enabled/disabled state of annotation menu
+              sorter 'show autocalculated first/last' corresponds to
+              alignment view</li>
+            <li>Restoring of Clustal, RNA Helices and T-Coffee
+              color schemes from BioJSON</li>
+          </ul>
+          <em>Applet</em>
+          <ul>
+            <li>Reorder sequences mirrored in cDNA/Protein split
+              frame</li>
             <li>Applet with Jmol examples not loading correctly</li>
-            </ul>
+          </ul>
         </div>
       </td>
     </tr>
@@ -691,7 +709,7 @@
     <tr>
       <td><div align="center">
           <strong><a name="Jalview.2.8.0b1">2.8.0b1</a><br />
-          <em>30/1/2014</em></strong>
+            <em>30/1/2014</em></strong>
         </div></td>
       <td>
         <ul>
@@ -1330,6 +1348,7 @@
         <ul>
           <li>URL links generated from description line for
             regular-expression based URL links (applet and application)
+
           
           <li>Non-positional feature URL links are shown in link
             menu</li>
@@ -1784,6 +1803,7 @@
           <li>Cancel button for DAS Feature Fetching
           <li>PCA and PDB Viewers zoom via mouse roller
           <li>User-defined sub-tree colours and sub-tree selection
+
           
           <li>'New Window' button on the 'Output to Text box'
         </ul>
@@ -1798,6 +1818,7 @@
           <li>Fixed Remove Empty Columns Bug (empty columns at end
             of alignment)
           <li>Slowed DAS Feature Fetching for increased robustness.
+
           
           <li>Made angle brackets in ASCII feature descriptions
             display correctly
@@ -1809,6 +1830,7 @@
           <li>WsDbFetch query/result association resolved
           <li>Tree leaf to sequence mapping improved
           <li>Smooth fonts switch moved to FontChooser dialog box.
+
           
         </ul>
       </td>
-- 
1.7.10.2