From 8eb830995e6e2bf47d5e0a5e355faaf7a72d3711 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 21 Dec 2016 15:17:10 +0000
Subject: [PATCH] JAL-2360 comment only

---
 src/jalview/schemes/ClustalxColourScheme.java |    3 +++
 1 file changed, 3 insertions(+)

diff --git a/src/jalview/schemes/ClustalxColourScheme.java b/src/jalview/schemes/ClustalxColourScheme.java
index 8ee4b78..2bb64fc 100755
--- a/src/jalview/schemes/ClustalxColourScheme.java
+++ b/src/jalview/schemes/ClustalxColourScheme.java
@@ -306,6 +306,9 @@ public class ClustalxColourScheme extends ResidueColourScheme
 
     if (i == 4)
     {
+      /*
+       * override to colour C pink if 100% conserved
+       */
       if (conses[27].isConserved(cons2, j, size, includeGaps))
       {
         currentColour = ClustalColour.PINK.colour;
-- 
1.7.10.2