From 8f599b2d8da5ad8ccfcd42139e1b6f170bc3ad0f Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 12 Jul 2006 11:52:42 +0000
Subject: [PATCH] Launch full app parameter takes servlet URL

---
 src/jalview/appletgui/AlignFrame.java |   12 +++++++++---
 1 file changed, 9 insertions(+), 3 deletions(-)

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 495469c..d1b2da9 100755
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -40,12 +40,17 @@ public class AlignFrame extends Frame implements ActionListener,
   int NEW_WINDOW_HEIGHT = 500;
   jalview.bin.JalviewLite applet;
 
+  String jalviewServletURL;
+
 
    public AlignFrame(AlignmentI al,
                      jalview.bin.JalviewLite applet,
                      String title,
                      boolean embedded)
   {
+
+    jalviewServletURL = applet.getParameter("APPLICATION_URL");
+
     try{
       jbInit();
     }catch(Exception ex)
@@ -507,9 +512,9 @@ public void itemStateChanged(ItemEvent evt)
 
   void launchFullApplication()
   {
-    StringBuffer url = new StringBuffer("http://bug.compbio.dundee.ac.uk:8080/Jalview/jalview?");
+    StringBuffer url = new StringBuffer(jalviewServletURL);
 
-    url.append("open="+
+    url.append("?open="+
                appendProtocol( applet.getParameter("file") ) );
 
     if(applet.getParameter("features")!=null)
@@ -2057,7 +2062,8 @@ public void itemStateChanged(ItemEvent evt)
         alignFrameMenuBar.add(helpMenu);
         fileMenu.add(inputText);
         fileMenu.add(outputTextboxMenu);
-       // fileMenu.add(loadApplication);
+        if(jalviewServletURL!=null)
+          fileMenu.add(loadApplication);
         fileMenu.addSeparator();
         fileMenu.add(loadTree);
         fileMenu.add(closeMenuItem);
-- 
1.7.10.2