From 90c1537ec500264f2ac89d64bb75a7ce14fa0181 Mon Sep 17 00:00:00 2001
From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Mon, 19 Nov 2012 21:18:21 +0000
Subject: [PATCH] bugfix

---
 src/MCview/PDBfile.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/MCview/PDBfile.java b/src/MCview/PDBfile.java
index 0ab28f6..9c30e67 100755
--- a/src/MCview/PDBfile.java
+++ b/src/MCview/PDBfile.java
@@ -244,7 +244,7 @@ public class PDBfile extends jalview.io.AlignFile
               sq.transferAnnotation(sp, aligns.get(q).getMappingFromS1(false));
               //sq.setSequenceFeatures(sp.getSequenceFeatures());
               int inspos=-1;
-              for (int ap=0;p<annotations.size();)
+              for (int ap=0;ap<annotations.size();)
               {
                 if (((AlignmentAnnotation)annotations.get(ap)).sequenceRef==sp) {
                   if (inspos==-1)
-- 
1.7.10.2