From 9245b43569781ac47b6f58872c77a3bf21bcc362 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 4 Oct 2017 15:19:02 +0100
Subject: [PATCH] JAL-2738 fix bug of premature exit from adding attributes

---
 src/jalview/io/vcf/VCFLoader.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/io/vcf/VCFLoader.java b/src/jalview/io/vcf/VCFLoader.java
index fd0e0d6..a3e7e5a 100644
--- a/src/jalview/io/vcf/VCFLoader.java
+++ b/src/jalview/io/vcf/VCFLoader.java
@@ -620,7 +620,7 @@ public class VCFLoader
       if (CSQ.equals(key))
       {
         addConsequences(variant, seq, sf, altAlelleIndex);
-        return;
+        continue;
       }
 
       /*
-- 
1.7.10.2