From 938156d64565a0dc49af81eaf62743aeb03d8435 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Tue, 9 May 2017 16:55:14 +0100 Subject: [PATCH] =?utf8?q?JAL-2507=20unpaired=20RNA=20marked=20as=20=E2=80=98?= =?utf8?q?=20=E2=80=98=20in=20Stockholm=20SS=20line?= MIME-Version: 1.0 Content-Type: text/plain; charset=utf8 Content-Transfer-Encoding: 8bit --- src/jalview/io/StockholmFile.java | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/jalview/io/StockholmFile.java b/src/jalview/io/StockholmFile.java index 32e6ff7..c2726a7 100644 --- a/src/jalview/io/StockholmFile.java +++ b/src/jalview/io/StockholmFile.java @@ -1084,8 +1084,8 @@ public class StockholmFile extends AlignFile { if (annot == null) { - // sensible gap character if one is available or make one up - return sequenceI == null ? '-' : sequenceI.getCharAt(k); + // sensible gap character + return ' '; } else { -- 1.7.10.2