From 9b2d0f1f47d3a073c91f354775bea6a274812709 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 15 Feb 2006 15:21:45 +0000
Subject: [PATCH] Threshold is a single element

---
 src/jalview/schemes/AnnotationColourGradient.java |    4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java
index 5825612..433af79 100755
--- a/src/jalview/schemes/AnnotationColourGradient.java
+++ b/src/jalview/schemes/AnnotationColourGradient.java
@@ -46,8 +46,8 @@ public class AnnotationColourGradient extends ResidueColourScheme
 
       aboveAnnotationThreshold = aboveThreshold;
 
-      if(aboveThreshold!=NO_THRESHOLD && annotation.graphLines!=null)
-        annotationThreshold = annotation.getGraphLine(0);
+      if(aboveThreshold!=NO_THRESHOLD && annotation.threshold!=null)
+        annotationThreshold = annotation.threshold;
 
       r1 = minColour.getRed();
       g1 = minColour.getGreen();
-- 
1.7.10.2