From 9dced81208f8f75424bcac37fc9e5069f0186a10 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 27 Apr 2007 14:44:10 +0000
Subject: [PATCH] padGaps moved

---
 src/jalview/datamodel/AlignmentAnnotation.java |    4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/src/jalview/datamodel/AlignmentAnnotation.java b/src/jalview/datamodel/AlignmentAnnotation.java
index 20a3633..bd50cd7 100755
--- a/src/jalview/datamodel/AlignmentAnnotation.java
+++ b/src/jalview/datamodel/AlignmentAnnotation.java
@@ -152,8 +152,10 @@ Loading...
       }
 
       if(annotations[i].displayCharacter==null)
+      {
+        padGaps = false;
         continue;
-
+      }
 
       if (annotations[i].displayCharacter.length() == 1
           && !annotations[i].displayCharacter.equals("H")
-- 
1.7.10.2