From 9f64c886b195cdf0ca0e1a97037cdbe266db6674 Mon Sep 17 00:00:00 2001
From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Tue, 4 Sep 2012 09:56:44 +0100
Subject: [PATCH] JAL-974 JRonn thresholds

---
 src/jalview/ws/jws2/AADisorderClient.java |    5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/src/jalview/ws/jws2/AADisorderClient.java b/src/jalview/ws/jws2/AADisorderClient.java
index f3f8ae3..87063b3 100644
--- a/src/jalview/ws/jws2/AADisorderClient.java
+++ b/src/jalview/ws/jws2/AADisorderClient.java
@@ -118,7 +118,10 @@ public class AADisorderClient extends JabawsAlignCalcWorker implements
     amap.put("Short", new HashMap<String, Object>());
     amap.get("Long").put(THRESHOLD, new double[] { 1, 0.5});
     amap.get("Short").put(THRESHOLD, new double[] { 1, 0.5});
-
+    annotMap.put(compbio.ws.client.Services.JronnWS.toString(),
+            amap = new HashMap<String, Map<String, Object>>());
+    amap.put("JRonn", new HashMap<String, Object>());
+    amap.get("JRonn").put(THRESHOLD, new double[] { 1, 0.5});
   }
 
   @Override
-- 
1.7.10.2