From 9f8bf271ad5f321799e1c2fd771d63118e7aeb43 Mon Sep 17 00:00:00 2001 From: jprocter Date: Wed, 20 Jun 2012 19:49:27 +0100 Subject: [PATCH] formatting --- src/jalview/ws/jws2/AAConsClient.java | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/src/jalview/ws/jws2/AAConsClient.java b/src/jalview/ws/jws2/AAConsClient.java index 58d0fa9..2c2c7cb 100644 --- a/src/jalview/ws/jws2/AAConsClient.java +++ b/src/jalview/ws/jws2/AAConsClient.java @@ -4,6 +4,7 @@ import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.AlignmentI; import jalview.datamodel.Annotation; import jalview.gui.AlignFrame; +import jalview.gui.AlignmentPanel; import jalview.ws.jws2.jabaws2.Jws2Instance; import jalview.ws.params.WsParamSetI; @@ -42,11 +43,9 @@ public class AAConsClient extends JabawsAlignCalcWorker public void updateResultAnnotation(boolean immediate) { - if (immediate || !calcMan.isWorking(this) && scoremanager != null) { AlignmentAnnotation annotation; - ; Map> scoremap = scoremanager.asMap(); int alWidth = alignViewport.getAlignment().getWidth(); AlignmentI alignment; @@ -73,7 +72,9 @@ public class AAConsClient extends JabawsAlignCalcWorker else { // simple annotation row - annotation = alignViewport.getAlignment().findOrCreateAnnotation(scr.getMethod(), true, null, null); + annotation = alignViewport.getAlignment() + .findOrCreateAnnotation(scr.getMethod(), true, null, + null); Annotation[] elm = new Annotation[alWidth]; if (alWidth == gapMap.length) // scr.getScores().size()) { -- 1.7.10.2