From a12de8e31d4a86f61f23e4eb62ae62ff03462511 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 9 Mar 2005 18:40:15 +0000
Subject: [PATCH] clear selection once group defined

---
 src/jalview/gui/PopupMenu.java |    5 +++++
 1 file changed, 5 insertions(+)

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index 38c3250..c09093b 100755
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -324,6 +324,10 @@ public class PopupMenu extends JPopupMenu
     if( superG !=null)
       superG.setSuperGroupProperties( sg );
 
+
+    //once group is defined, remove selection rubberband
+    ap.av.setRubberbandGroup(null);
+
     ap.seqPanel.seqCanvas.paintFlag=true;
     ap.seqPanel.repaint();
   }
@@ -490,6 +494,7 @@ public class PopupMenu extends JPopupMenu
 
     // this method won't add a new group if it already exists
     ap.av.alignment.addGroup(sg);
+
     return sg;
   }
 
-- 
1.7.10.2