From a3e8ff6b8506d580c60d983b59a686fbb87d922c Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 14 Dec 2004 11:20:51 +0000
Subject: [PATCH] Sequence selection now done via popup menu

---
 src/jalview/gui/IdPanel.java |   24 ++++++++++++++++++++----
 1 file changed, 20 insertions(+), 4 deletions(-)

diff --git a/src/jalview/gui/IdPanel.java b/src/jalview/gui/IdPanel.java
index 14f60d5..644d2ce 100755
--- a/src/jalview/gui/IdPanel.java
+++ b/src/jalview/gui/IdPanel.java
@@ -53,7 +53,8 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
          if(selectedSequenceGroup==null)
          {
            selectedSequenceGroup = new SequenceGroup();
-           av.alignment.addGroup( selectedSequenceGroup );
+           av.setRubberbandGroup( selectedSequenceGroup );
+          // av.alignment.addGroup( selectedSequenceGroup );
            selectedSequenceGroup.setStartRes(0);
            selectedSequenceGroup.setEndRes( pickedSeq.getSequence().length());
          }
@@ -114,7 +115,11 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
 
       if( javax.swing.SwingUtilities.isRightMouseButton(e))
       {
-        String id = av.getAlignment().getSequenceAt(seq).getName();
+        jalview.gui.PopupMenu pop = new jalview.gui.PopupMenu( av , alignPanel.seqPanel);
+        pop.show(this, e.getX(), y);
+
+
+  /*      String id = av.getAlignment().getSequenceAt(seq).getName();
         String s = (String)JOptionPane.showInternalInputDialog(
                     this,
                     "Edit sequence name",
@@ -128,12 +133,23 @@ public class IdPanel extends JPanel implements MouseListener, MouseMotionListene
         {
           av.getAlignment().getSequenceAt(seq).setName(s);
           alignPanel.RefreshPanels();
-        }
+        }*/
 
       }
       else
       {
-        selectedSequenceGroup =  av.alignment.findGroup(seq);
+
+        selectedSequenceGroup = av.getRubberbandGroup();
+        if(selectedSequenceGroup==null)
+        {
+          selectedSequenceGroup = new SequenceGroup();
+          av.setRubberbandGroup(selectedSequenceGroup);
+        }
+
+        selectedSequenceGroup.setStartRes(0);
+        selectedSequenceGroup.setEndRes( av.getAlignment().getWidth()-1 );
+
+       // selectedSequenceGroup = av.alignment.findGroup(seq);
 
         if (seq != -1)
           selectSeqs(seq,seq);
-- 
1.7.10.2