From a48744baf419c7c2cbbc548e7e7eb5098fd93b56 Mon Sep 17 00:00:00 2001
From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Thu, 7 Jun 2012 15:25:20 +0100
Subject: [PATCH] fix for bug introduced with
 commit:b81d4d7d46ea8b1c89df086fb847baab6b69d427

---
 src/jalview/viewmodel/AlignmentViewport.java |    2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java
index 36da772..f14ddd4 100644
--- a/src/jalview/viewmodel/AlignmentViewport.java
+++ b/src/jalview/viewmodel/AlignmentViewport.java
@@ -1303,8 +1303,8 @@ public abstract class AlignmentViewport implements AlignViewportI
       if (sg.cs != null)
       {
         sg.cs.alignmentChanged(sg, hiddenRepSequences);
-        sg.recalcConservation();
       }
+      sg.recalcConservation();
     }
   }
 
-- 
1.7.10.2