From a70633d40c8830236fb2b88809447fa2de997c6d Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 2 Dec 2005 17:06:51 +0000
Subject: [PATCH] Output from newick menu item bug fixed

---
 src/jalview/appletgui/TreePanel.java |    3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/src/jalview/appletgui/TreePanel.java b/src/jalview/appletgui/TreePanel.java
index 6eeb3d8..99ad412 100755
--- a/src/jalview/appletgui/TreePanel.java
+++ b/src/jalview/appletgui/TreePanel.java
@@ -33,7 +33,6 @@ public class TreePanel extends Frame
   SequenceI[] seq;
   String type;
   String pwtype;
-  AlignmentPanel ap;
   int start;
   int end;
   TreeCanvas treeCanvas;
@@ -168,7 +167,7 @@ public class TreePanel extends Frame
   {
     jalview.io.NewickFile fout = new jalview.io.NewickFile(tree.getTopNode());
     String output = fout.print(false, true);
-    CutAndPasteTransfer cap = new CutAndPasteTransfer(false, ap.alignFrame.applet);
+    CutAndPasteTransfer cap = new CutAndPasteTransfer(false, null);
     cap.setText(output);
     java.awt.Frame frame = new java.awt.Frame();
     frame.add(cap);
-- 
1.7.10.2