From a7bda2e291fc5d01b6e3e43ba6215b78067beb5d Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Thu, 16 Jun 2016 13:50:55 +0100 Subject: [PATCH] JAL-2110 todo - select mappings involving sequences in alignment --- src/jalview/datamodel/Alignment.java | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java index f14539b..ed1c92e 100755 --- a/src/jalview/datamodel/Alignment.java +++ b/src/jalview/datamodel/Alignment.java @@ -1357,6 +1357,10 @@ public class Alignment implements AlignmentI @Override public List getCodonFrames() { + // TODO: Fix this method to fix failing AlignedCodonFrame tests + // this behaviour is currently incorrect. method should return codon frames + // for just the alignment, + // selected from dataset return dataset != null ? dataset.getCodonFrames() : codonFrameList; } -- 1.7.10.2