From a83810ff98dde4f414fa348af95f41ee852b3576 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 25 Jan 2005 17:06:09 +0000
Subject: [PATCH] clustalColour bug fixed, clear selection

---
 src/jalview/gui/AlignFrame.java |    4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index f5d2e0c..b0d1b32 100755
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -33,6 +33,7 @@ public class AlignFrame extends GAlignFrame
   public AlignFrame(AlignmentI al)
   {
     super();
+
     viewport = new AlignViewport(al,true,true,true,false);
     alignPanel = new AlignmentPanel(this, viewport);
     getContentPane().add(alignPanel, java.awt.BorderLayout.CENTER);
@@ -222,6 +223,7 @@ public class AlignFrame extends GAlignFrame
 
   public void deselectAllSequenceMenuItem_actionPerformed(ActionEvent e)
   {
+    viewport.setRubberbandGroup(null);
     viewport.getSelection().clear();
     PaintRefresher.Refresh(null);
   }
@@ -474,7 +476,7 @@ public class AlignFrame extends GAlignFrame
   }
 
 
-  public void Colour_actionPerformed(ActionEvent e)
+  public void clustalColour_actionPerformed(ActionEvent e)
   {
     viewport.setGlobalColourScheme(new ClustalxColourScheme( ));
     conservationMenuItem.setSelected(false);
-- 
1.7.10.2