From a90c6029a721c0e00a671a7ed6cf3a93fe047d59 Mon Sep 17 00:00:00 2001 From: kjvdheide Date: Tue, 9 Jan 2018 23:07:31 +0000 Subject: [PATCH] JAL-2805 correct nexus parser is now created --- src/jalview/ext/forester/io/ForesterParser.java | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/jalview/ext/forester/io/ForesterParser.java b/src/jalview/ext/forester/io/ForesterParser.java index 469463e..b0c2bdb 100644 --- a/src/jalview/ext/forester/io/ForesterParser.java +++ b/src/jalview/ext/forester/io/ForesterParser.java @@ -35,7 +35,7 @@ public class ForesterParser nxParser.setReplaceUnderscores( AptxInit.APTX_CONFIG.isReplaceUnderscoresInNhParsing()); nxParser.setIgnoreQuotes(false); - return new ForesterParser(new NexusPhylogeniesParser(), file); + return new ForesterParser(nxParser, file); } public static ForesterParser createPhyloXmlParser(File file) -- 1.7.10.2