From a923c0fa51ce22d052ac06f54b006c57385cc8e0 Mon Sep 17 00:00:00 2001
From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Fri, 7 Dec 2012 15:51:52 +0000
Subject: [PATCH] convenience function to get the RNA model for an annotation
 row (probably unused - need to check)

---
 src/jalview/datamodel/AlignmentAnnotation.java |    6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/src/jalview/datamodel/AlignmentAnnotation.java b/src/jalview/datamodel/AlignmentAnnotation.java
index 02446c4..8115af4 100755
--- a/src/jalview/datamodel/AlignmentAnnotation.java
+++ b/src/jalview/datamodel/AlignmentAnnotation.java
@@ -202,7 +202,11 @@ public class AlignmentAnnotation
       return NO_GRAPH;
     }
   }
-
+    // JBPNote: what does this do ?
+  public void ConcenStru(CharSequence RNAannot) throws WUSSParseException
+  {
+	  bps = Rna.GetModeleBP(RNAannot);
+  }
   /**
    * Creates a new AlignmentAnnotation object.
    * 
-- 
1.7.10.2