From acd3e0997c5f35a4594db7947075b1df86d87a2c Mon Sep 17 00:00:00 2001
From: amwaterhouse <amwaterhouse@issues.jalview.org>
Date: Thu, 6 Oct 2005 15:54:00 +0000
Subject: [PATCH] Provenance must contain 1 entry, Alignment may have multiple
 AlignmentAnnotations

git-svn-id: https://svn.lifesci.dundee.ac.uk/svn/repository/trunk@54 be28352e-c001-0410-b1a7-c7978e42abec
---
 schemas/vamsas.xsd |   30 +++++++++++++++---------------
 1 file changed, 15 insertions(+), 15 deletions(-)

diff --git a/schemas/vamsas.xsd b/schemas/vamsas.xsd
index d259b25..de83645 100644
--- a/schemas/vamsas.xsd
+++ b/schemas/vamsas.xsd
@@ -14,8 +14,8 @@
 	<xs:element name="Tree">
 		<xs:complexType>
 			<xs:sequence>
-				<xs:element name="title" type="xs:string" minOccurs="0" maxOccurs="1"/>
-				<xs:element name="newick" minOccurs="1" maxOccurs="unbounded">
+				<xs:element name="title" type="xs:string" minOccurs="0"/>
+				<xs:element name="newick" maxOccurs="unbounded">
 					<xs:complexType>
 						<xs:simpleContent>
 							<xs:extension base="xs:string">
@@ -25,7 +25,7 @@
 						</xs:simpleContent>
 					</xs:complexType>
 				</xs:element>
-				<xs:element ref="vamsas:Provenance" minOccurs="1" maxOccurs="1"/>
+				<xs:element ref="vamsas:Provenance"/>
 			</xs:sequence>
 			<xs:attribute name="id" type="xs:ID" use="optional"/>
 		</xs:complexType>
@@ -33,7 +33,7 @@
 	<xs:element name="Provenance">
 		<xs:complexType>
 			<xs:sequence>
-				<xs:element name="entry" minOccurs="0" maxOccurs="unbounded">
+				<xs:element name="entry" maxOccurs="unbounded">
 					<xs:complexType>
 						<xs:sequence>
 							<xs:element name="User" type="xs:string"/>
@@ -75,7 +75,7 @@
 							<xs:element name="description" type="xs:string" minOccurs="0"/>
 							<xs:element name="status" type="xs:string" minOccurs="0"/>
 							<xs:element ref="vamsas:annotationElement" minOccurs="0" maxOccurs="unbounded"/>
-							<xs:element ref="vamsas:Provenance" minOccurs="0" maxOccurs="unbounded"/>
+							<xs:element ref="vamsas:Provenance" maxOccurs="unbounded"/>
 						</xs:sequence>
 						<xs:attribute name="type" type="xs:string" use="required"/>
 						<xs:attribute name="end" type="xs:string" use="required"/>
@@ -87,7 +87,7 @@
 				<xs:element name="Alignment" minOccurs="0" maxOccurs="unbounded">
 					<xs:complexType>
 						<xs:sequence>
-							<xs:element name="AlignmentAnnotations" minOccurs="0">
+							<xs:element name="AlignmentAnnotations" minOccurs="0" maxOccurs="unbounded">
 								<xs:complexType>
 									<xs:sequence>
 										<xs:element ref="vamsas:annotationElement" maxOccurs="unbounded"/>
@@ -100,7 +100,7 @@
 								</xs:complexType>
 							</xs:element>
 							<xs:element ref="vamsas:Tree" minOccurs="0" maxOccurs="unbounded"/>
-							<xs:element name="alignmentSequence" minOccurs="2" maxOccurs="unbounded">
+							<xs:element name="alignmentSequence" maxOccurs="unbounded">
 								<xs:complexType>
 									<xs:complexContent>
 										<xs:extension base="vamsas:SequenceType">
@@ -118,7 +118,7 @@
 					</xs:complexType>
 				</xs:element>
 				<xs:element ref="vamsas:Tree" minOccurs="0" maxOccurs="unbounded"/>
-				<xs:element ref="vamsas:Provenance" minOccurs="1" maxOccurs="unbounded"/>
+				<xs:element ref="vamsas:Provenance"/>
 			</xs:sequence>
 			<xs:attribute name="id" type="xs:ID" use="optional"/>
 		</xs:complexType>
@@ -126,16 +126,16 @@
 	<xs:element name="annotationElement">
 		<xs:complexType>
 			<xs:sequence>
-				<xs:element name="displayCharacter" type="xs:string" maxOccurs="1" minOccurs="0"/>
-				<xs:element name="description" type="xs:string" maxOccurs="1" minOccurs="0"/>
-				<xs:element name="secondaryStructure" maxOccurs="1" minOccurs="0">
+				<xs:element name="displayCharacter" type="xs:string" minOccurs="0"/>
+				<xs:element name="description" type="xs:string" minOccurs="0"/>
+				<xs:element name="secondaryStructure" minOccurs="0">
 					<xs:simpleType>
 						<xs:restriction base="xs:string">
 							<xs:length value="1"/>
 						</xs:restriction>
 					</xs:simpleType>
 				</xs:element>
-				<xs:element name="value" type="xs:float" maxOccurs="1" minOccurs="0"/>
+				<xs:element name="value" type="xs:float" minOccurs="0"/>
 			</xs:sequence>
 			<xs:attribute name="position" type="xs:int" use="required"/>
 			<xs:attribute name="id" type="xs:ID" use="optional"/>
@@ -143,8 +143,8 @@
 	</xs:element>
 	<xs:complexType name="SequenceType">
 		<xs:sequence>
-			<xs:element name="sequence" type="xs:string" maxOccurs="1" minOccurs="1"/>
-			<xs:element name="name" type="xs:string" maxOccurs="1" minOccurs="1"/>
+			<xs:element name="sequence" type="xs:string"/>
+			<xs:element name="name" type="xs:string"/>
 		</xs:sequence>
 		<xs:attribute name="start" type="xs:int" use="required"/>
 		<xs:attribute name="end" type="xs:int" use="required"/>
@@ -155,7 +155,7 @@
 				<xs:element name="Application" minOccurs="0" maxOccurs="unbounded">
 					<xs:complexType>
 						<xs:sequence>
-							<xs:element name="User" minOccurs="1" maxOccurs="unbounded">
+							<xs:element name="User" maxOccurs="unbounded">
 								<xs:complexType>
 									<xs:attribute name="fullname" type="xs:string"/>
 									<xs:attribute name="organization" type="xs:string"/>
-- 
1.7.10.2