From b4877bc99e12cf4465e43e090e19277c3139ce77 Mon Sep 17 00:00:00 2001 From: jprocter Date: Thu, 27 Oct 2011 14:53:27 +0100 Subject: [PATCH] (JAL-969) removed TODOs --- src/jalview/appletgui/APopupMenu.java | 1 - src/jalview/gui/PopupMenu.java | 1 - src/jalview/viewmodel/AlignmentViewport.java | 2 -- 3 files changed, 4 deletions(-) diff --git a/src/jalview/appletgui/APopupMenu.java b/src/jalview/appletgui/APopupMenu.java index 7a99a20..b45fa6b 100755 --- a/src/jalview/appletgui/APopupMenu.java +++ b/src/jalview/appletgui/APopupMenu.java @@ -529,7 +529,6 @@ public class APopupMenu extends java.awt.PopupMenu implements Vector regions = new Vector(); if (sg != null) { - // TODO test change case behaves identically in JvLite int[][] startEnd = ap.av.getVisibleRegionBoundaries(sg.getStartRes(), sg.getEndRes() + 1); diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java index 45e976f..23a5008 100644 --- a/src/jalview/gui/PopupMenu.java +++ b/src/jalview/gui/PopupMenu.java @@ -1882,7 +1882,6 @@ public class PopupMenu extends JPopupMenu public void discoverPDB_actionPerformed() { - // TODO: test: verify PDB sequence discovery behaves correctly for group selections final SequenceI[] sequences = ((ap.av.getSelectionGroup() == null) ? new SequenceI[] { sequence } diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java index 0cd23de..8e66188 100644 --- a/src/jalview/viewmodel/AlignmentViewport.java +++ b/src/jalview/viewmodel/AlignmentViewport.java @@ -207,7 +207,6 @@ public abstract class AlignmentViewport implements AlignViewportI public boolean isCalcInProgress() { - // TODO generalise to iterate over all calculators associated with av return calculator.isWorking(); } @@ -998,7 +997,6 @@ public abstract class AlignmentViewport implements AlignViewportI */ public void alignmentChanged(AlignmentViewPanel ap) { - // TODO: test jvLite always pads, and that JVD has configurable padding. if (isPadGaps()) { alignment.padGaps(); -- 1.7.10.2