From bccb0e877e424519b1d799278cdb529f974cb026 Mon Sep 17 00:00:00 2001 From: jprocter Date: Wed, 28 Apr 2010 10:22:27 +0000 Subject: [PATCH] envision2 service --- help/html/webServices/index.html | 127 +++++++++++++++++++++----------------- 1 file changed, 70 insertions(+), 57 deletions(-) diff --git a/help/html/webServices/index.html b/help/html/webServices/index.html index 021e31e..815448b 100755 --- a/help/html/webServices/index.html +++ b/help/html/webServices/index.html @@ -1,63 +1,76 @@ - - Web Services - -

Web services

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Jalview includes clients for a variety of web services for both bioinformatic data retrieval and analysis. + + + +Web Services + + +

Web services

+ +

Jalview includes clients for a variety of web services for both +bioinformatic data retrieval and analysis.

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  • The Sequence Fetcher + utilises web services for sequence, alignment and structure retrieval + provided by the European Bioinformatics Institute (EBI) and Distributed + Annotation System servers that are capable of serving sequences.
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  • The DAS Feature Fetcher enables the retrieval and + visualization of features from DAS annotation sources
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  • Jalview SOAP Web Services for sequence and alignment analysis + are provided by the University of Dundee, and are available from the + Alignment window's Web Service menu.
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    Jalview's distributed computations are SOAP based services exposing - protein sequence alignment and secondary structure prediction programs. These services actually run - on the cluster based in the School of Life Sciences, University of - Dundee, and are maintained by the Barton group. -

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    Web Service Dialog Box

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    Jalview's distributed computations are SOAP based services +exposing protein sequence alignment and secondary structure prediction +programs. These services actually run on the cluster based in the School +of Life Sciences, University of Dundee, and are maintained by the Barton +group.

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    Envision2 Services

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    Jalview 2.5 includes a client to enable the user to +submit one or more sequences or sequence IDs to analysis workflows provided +by the EnVision2 +web application. This allows Jalview users to easily access the EnCore network of +databases and analysis services developed by members of ENFIN.

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    Web Service Dialog Box

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    - This dialog box is displayed when a web service job - is submitted. It gives the name of the service and - any method citation information, and monitors the - progress of the calculation. The cancel button will - permanently cancel the job, but this is only - possible for some services. -

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    Current services: -

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    Watch this space! These are some of the services +

    This dialog box is displayed when a web service job is submitted. +It gives the name of the service and any method citation information, +and monitors the progress of the calculation. The cancel button will +permanently cancel the job, but this is only possible for some services. +

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    Current services: +

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    + -- 1.7.10.2