From c64a7d0a951e5ceee8cce4c8b15f86464e287b12 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Mon, 18 Jul 2016 16:38:53 +0100
Subject: [PATCH] JAL-2099 ensure initial setting of scaleAbove reaches
 viewport

---
 src/jalview/appletgui/AlignFrame.java |    1 +
 1 file changed, 1 insertion(+)

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 8f1f2fd..cbb5c99 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -219,6 +219,7 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
     {
       viewport.setColumnSelection(columnSelection);
     }
+    viewport.setScaleAboveWrapped(scaleAbove.getState());
 
     alignPanel = new AlignmentPanel(this, viewport);
     avc = new jalview.controller.AlignViewController(this, viewport,
-- 
1.7.10.2