From c8d9efea6f8071639076a4ea3156852e4eeafa33 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 7 Nov 2006 16:14:26 +0000
Subject: [PATCH] warning note added to consequence

---
 src/jalview/analysis/Conservation.java |    3 +++
 1 file changed, 3 insertions(+)

diff --git a/src/jalview/analysis/Conservation.java b/src/jalview/analysis/Conservation.java
index ca5bbb3..1342e93 100755
--- a/src/jalview/analysis/Conservation.java
+++ b/src/jalview/analysis/Conservation.java
@@ -295,6 +295,9 @@ public class Conservation
         Hashtable resultHash ;
         Enumeration enumeration;
 
+        //NOTE THIS SHOULD CHECK IF THE CONSEQUENCE ALREADY
+        //EXISTS AND NOT OVERWRITE WITH '-', BUT THIS CASE
+        //DOES NOT EXIST IN JALVIEW 2.1.2
         for(int i=0; i<start; i++)
           consString.append('-');
 
-- 
1.7.10.2