From d18e36d8f4a511e82af3564647b3154267b177c6 Mon Sep 17 00:00:00 2001 From: BobHanson Date: Mon, 8 Jun 2020 16:59:50 -0500 Subject: [PATCH] from develep --- src/jalview/gui/FeatureSettings.java | 6 ++++-- src/jalview/ws/SequenceFetcher.java | 5 ----- 2 files changed, 4 insertions(+), 7 deletions(-) diff --git a/src/jalview/gui/FeatureSettings.java b/src/jalview/gui/FeatureSettings.java index ddadd6d..07812f1 100644 --- a/src/jalview/gui/FeatureSettings.java +++ b/src/jalview/gui/FeatureSettings.java @@ -486,7 +486,8 @@ public class FeatureSettings extends JPanel @Override public void actionPerformed(ActionEvent e) { - af.avc.sortAlignmentByFeatureScore(Arrays.asList(new String[] + af.avc.sortAlignmentByFeatureScore( + Arrays.asList(new String[] { type })); } }); @@ -498,7 +499,8 @@ public class FeatureSettings extends JPanel @Override public void actionPerformed(ActionEvent e) { - af.avc.sortAlignmentByFeatureDensity(Arrays.asList(new String[] + af.avc.sortAlignmentByFeatureDensity( + Arrays.asList(new String[] { type })); } }); diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index 10a2b28..a16a66c 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -82,11 +82,6 @@ public class SequenceFetcher extends ASequenceFetcher implements ApplicationSing */ public SequenceFetcher() { - addAllDatabases(); - } - - public void addAllDatabases() - { addDBRefSourceImpl(EnsemblGene.class); // includes EnsemblGenomes.class addDBRefSourceImpl(Uniprot.class); // includes UniprotName.class // addDBRefSourceImpl(EmblSource.class); -- 1.7.10.2