From d2067655b65fc8ec1361ebe539d0eb02bc4a5342 Mon Sep 17 00:00:00 2001
From: tcofoegbu <tcnofoegbu@dundee.ac.uk>
Date: Tue, 2 Jun 2015 16:51:30 +0100
Subject: [PATCH 1/1] JAL-1641 updated build.xml

---
 build.xml |   26 ++++++++++++++++++++++++++
 1 file changed, 26 insertions(+)

diff --git a/build.xml b/build.xml
index 273c9e0..e77dfb2 100755
--- a/build.xml
+++ b/build.xml
@@ -641,6 +641,8 @@
   </copy>
   <jar update="true" index="true" jarfile="${packageDir}/examples/${jalviewLiteJar}"/>
   <jar update="true" index="true" jarfile="${packageDir}/examples/${jmolJar}">
+  <jar update="true" index="true" jarfile="${packageDir}/examples/${javaJson}">
+  <jar update="true" index="true" jarfile="${packageDir}/examples/${jsonSimple}">
     <manifest>
       <attribute name="Application-Name" value="Jmol (bundled with JalviewLite)"/>
       <!--          <attribute name="Permissions" value="sandbox" /> -->
@@ -720,21 +722,37 @@
   <!-- create differently privileged artefacts -->
   <copy file="${packageDir}/examples/${jalviewLiteJar}" tofile="${packageDir}/examples/u_${jalviewLiteJar}" />
   <copy file="${packageDir}/examples/${jmolJar}" tofile="${packageDir}/examples/u_${jmolJar}" overwrite="true"/>
+  <copy file="${packageDir}/examples/${javaJson}" tofile="${packageDir}/examples/u_${javaJson}" overwrite="true"/>
+  <copy file="${packageDir}/examples/${jsonSimple}" tofile="${packageDir}/examples/u_${jsonSimple}" overwrite="true"/>
   <copy file="${packageDir}/examples/${jalviewLiteJar}" tofile="${packageDir}/examples/ap_${jalviewLiteJar}" />
   <copy file="${packageDir}/examples/${jmolJar}" tofile="${packageDir}/examples/ap_${jmolJar}"/>
+  <copy file="${packageDir}/examples/${javaJson}" tofile="${packageDir}/examples/ap_${javaJson}"/>
+  <copy file="${packageDir}/examples/${jsonSimple}" tofile="${packageDir}/examples/ap_${jsonSimple}"/>
   <ap_applet.jar jarfile="${packageDir}/examples/ap_${jalviewLiteJar}" />
   <ap_applet.jar jarfile="${packageDir}/examples/ap_${jmolJar}" />
+  <ap_applet.jar jarfile="${packageDir}/examples/ap_${javaJson}" />
+  <ap_applet.jar jarfile="${packageDir}/examples/ap_${jsonSimple}" />
   <copy file="${packageDir}/examples/${jalviewLiteJar}" tofile="${packageDir}/examples/tl_${jalviewLiteJar}" />
   <copy file="${packageDir}/examples/${jmolJar}" tofile="${packageDir}/examples/tl_${jmolJar}" />
+  <copy file="${packageDir}/examples/${javaJson}" tofile="${packageDir}/examples/tl_${javaJson}" />
+  <copy file="${packageDir}/examples/${jsonSimple}" tofile="${packageDir}/examples/tl_${jsonSimple}" />
   <tl_applet.jar jarfile="${packageDir}/examples/tl_${jalviewLiteJar}" />
   <tl_applet.jar jarfile="${packageDir}/examples/tl_${jmolJar}" />
+  <tl_applet.jar jarfile="${packageDir}/examples/tl_${javaJson}" />
+  <tl_applet.jar jarfile="${packageDir}/examples/tl_${jsonSimple}" />
   <copy file="${packageDir}/examples/${jalviewLiteJar}" tofile="${packageDir}/examples/to_${jalviewLiteJar}" />
   <copy file="${packageDir}/examples/${jmolJar}" tofile="${packageDir}/examples/to_${jmolJar}" />
+  <copy file="${packageDir}/examples/${javaJson}" tofile="${packageDir}/examples/to_${javaJson}" />
+  <copy file="${packageDir}/examples/${jsonSimple}" tofile="${packageDir}/examples/to_${jsonSimple}" />
   <to_applet.jar jarfile="${packageDir}/examples/to_${jalviewLiteJar}" />
   <to_applet.jar jarfile="${packageDir}/examples/to_${jmolJar}" />
+  <to_applet.jar jarfile="${packageDir}/examples/to_${javaJson}" />
+  <to_applet.jar jarfile="${packageDir}/examples/to_${jsonSimple}" />
   <!-- finally, create manifest for original jars -->
   <applet.jar jarfile="${packageDir}/examples/${jalviewLiteJar}" />
   <applet.jar jarfile="${packageDir}/examples/${jmolJar}" />
+  <applet.jar jarfile="${packageDir}/examples/${javaJson}" />
+  <applet.jar jarfile="${packageDir}/examples/${jsonSimple}" />
 
   <!-- todo - write examples/downloads for alternate versions of the applet -->
   <signjar storepass="${jalview.keystore.pass}" keypass="${jalview.key.pass}" keystore="${jalview.keystore}" alias="${jalview.key}" lazy="false" verbose="false">
@@ -743,12 +761,20 @@
       <exclude name="u_*.jar"/>
       <include name="${jalviewLiteJar}" />
       <include name="${jmolJar}" />
+      <include name="${javaJson}" />
+      <include name="${jsonSimple}" />
       <include name="to_${jalviewLiteJar}" />
       <include name="to_${jmolJar}" />
+      <include name="to_${javaJson}" />
+      <include name="to_${jsonSimple}" />
       <include name="tl_${jalviewLiteJar}" />
       <include name="tl_${jmolJar}" />
+      <include name="tl_${javaJson}" />
+      <include name="tl_${jsonSimple}" />
       <include name="ap_${jalviewLiteJar}" />
       <include name="ap_${jmolJar}" />
+      <include name="ap_${javaJson}" />
+      <include name="ap_${jsonSimple}" />
     </fileset>
   </signjar>
   <!-- bizarre bug causes JmolApplet to always get signed, even if excluded from above. so copy explicitly -->
-- 
1.7.10.2