From d724a5f7d41eba9764f29a63bb8584d3bbdc81a4 Mon Sep 17 00:00:00 2001 From: jprocter Date: Tue, 26 Jul 2011 12:52:08 +0100 Subject: [PATCH] example alignment for JAL-862 - removed signal peptides --- examples/uniref50_mz.fa | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) create mode 100644 examples/uniref50_mz.fa diff --git a/examples/uniref50_mz.fa b/examples/uniref50_mz.fa new file mode 100644 index 0000000..9974fc7 --- /dev/null +++ b/examples/uniref50_mz.fa @@ -0,0 +1,30 @@ +>FER1_MAIZE/53-118 Ferredoxin-1, chloroplast precursor +ATYNVKLITPEGEVELQVPDDVYILDQAEEDGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSYLDD +>FER_CAPAA/1-66 Ferredoxin +ASYKVKLITPDGPIEFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDD +>FER_CAPAN/48-113 Ferredoxin, chloroplast precursor +ASYKVKLITPDGPIEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDD +>FER1_SOLLC/48-113 Ferredoxin-1, chloroplast precursor +ASYKVKLITPEGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDE +>Q93XJ9_SOLTU/48-113 Ferredoxin I precursor +ASYKVKLITPDGPIEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGKFLDD +>FER1_PEA/53-118 Ferredoxin-1, chloroplast precursor +ASYKVKLVTPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDD +>Q7XA98_TRIPR/56-121 Ferredoxin I +ATYKVKLITPEGPQEFDCPDDVYILDHAEEVGIELPYSCRAGSCSSCAGKVVNGNVNQEDGSFLDD +>FER1_MESCR/52-117 Ferredoxin-1, chloroplast precursor +AAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDD +>FER1_SPIOL/51-116 Ferredoxin-1, chloroplast precursor +AAYKVTLVTPTGNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDD +>FER3_RAPSA/1-66 Ferredoxin, leaf L-A +ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDD +>FER1_ARATH/53-118 Ferredoxin-1, chloroplast precursor +ATYKVKFITPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDD +>FER_BRANA/1-66 Ferredoxin +ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDD +>FER2_ARATH/53-118 Ferredoxin-2, chloroplast precursor +ATYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD +>Q93Z60_ARATH/53-118 At1g10960/T19D16_12 +ATYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDD +>O80429_MAIZE/45-110 Ferredoxin +ATYNVKLITPEGEVELQVPDDVYILDFAEEEGIDLPFSCRAGSCSSCAGKVVSGSVDQSDQSFLND -- 1.7.10.2