From dad44a64adbed84c9bf40a49fc8fa01e9e6074f0 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Tue, 16 Nov 2004 15:17:07 +0000
Subject: [PATCH] Halfway to wrapalignment, shows swissprot file

---
 src/jalview/gui/IdCanvas.java |   28 +++++++++++++---------------
 1 file changed, 13 insertions(+), 15 deletions(-)

diff --git a/src/jalview/gui/IdCanvas.java b/src/jalview/gui/IdCanvas.java
index fee86cd..67fabf7 100755
--- a/src/jalview/gui/IdCanvas.java
+++ b/src/jalview/gui/IdCanvas.java
@@ -42,13 +42,12 @@ public class IdCanvas extends JPanel
 
       String string = ds.getName() + "/" + ds.getStart() + "-" + ds.getEnd();
 
-      gg.drawString(string,0,AlignmentUtil.getPixelHeight(starty,i,charHeight) + ypos + charHeight/2);
+      gg.drawString(string,0,AlignmentUtil.getPixelHeight(starty,i,charHeight) + ypos + charHeight-   (charHeight/5));
 
   }
 
   public void paintComponent(Graphics g) {
     AlignmentI da         = av.getAlignment();
-    int        charWidth  = (int)av.getCharWidth();
     int        charHeight = av.getCharHeight();
     Font       f          = av.getFont();
 
@@ -93,15 +92,17 @@ public class IdCanvas extends JPanel
 
 
 
-    if (av.getWrapAlignment()) {
+    if (av.getWrapAlignment())
+    {
 	starty = starty%av.getChunkHeight();
 
 	int ypos     = 0;
 	int rowstart = starty;
 
-	if (starty == 0) {
+	if (starty == 0)
 	    ypos = 2*charHeight;
-	} else if (starty == 1) {
+       else if (starty == 1)
+       {
 	    starty = 0;
 	    ypos = charHeight;
 	}
@@ -135,7 +136,7 @@ public class IdCanvas extends JPanel
 
 	    for (int i = starty; i < endy; i++) {
 	      SequenceI s = da.getSequenceAt(i);
-	      drawIdString(gg,s,i,starty,ypos);
+      	      drawIdString(gg,s,i,starty,ypos);
 	    }
 
 	    ypos   += av.getChunkHeight();
@@ -160,14 +161,12 @@ public class IdCanvas extends JPanel
     {
 
       // Selected sequence colours
-
-      if (av.getSelection().contains(da.getSequenceAt(i))) {
-        if (currentColor != Color.gray) {
+      if (av.getSelection().contains(da.getSequenceAt(i)))
+      {
           currentColor     = Color.gray;
           currentTextColor = Color.black;
-        }
       }
-      else if (da.getSequenceAt(i).getColor() != null)
+      else
       {
         currentColor = da.getSequenceAt(i).getColor();
         currentTextColor = Color.black;
@@ -175,13 +174,12 @@ public class IdCanvas extends JPanel
 
       gg.setColor(currentColor);
 
-      if (currentColor != Color.BLACK)
-      {
-        gg.fillRect(0,
+
+
+      gg.fillRect(0,
                     AlignmentUtil.getPixelHeight(starty,i,charHeight),
                     getWidth(),
                     charHeight);
-      }
 
       gg.setColor(currentTextColor);
 
-- 
1.7.10.2