From db98ee02807c38b65ad2585237fc379b335fb0ee Mon Sep 17 00:00:00 2001 From: jprocter Date: Tue, 5 Sep 2006 09:50:42 +0000 Subject: [PATCH] enum constants for Glyph types. git-svn-id: https://svn.lifesci.dundee.ac.uk/svn/repository/trunk@235 be28352e-c001-0410-b1a7-c7978e42abec --- src/org/vamsas/objects/utils/GlyphDictionary.java | 23 +++++++++++++++++++++ 1 file changed, 23 insertions(+) create mode 100644 src/org/vamsas/objects/utils/GlyphDictionary.java diff --git a/src/org/vamsas/objects/utils/GlyphDictionary.java b/src/org/vamsas/objects/utils/GlyphDictionary.java new file mode 100644 index 0000000..1ed7b20 --- /dev/null +++ b/src/org/vamsas/objects/utils/GlyphDictionary.java @@ -0,0 +1,23 @@ +package org.vamsas.objects.utils; + +/** + * dict attribute values for glyph symbol sets found in org.vamsas.objects.core.AnnotationElement + * TODO: add validators and multilength symbols. + * @author JimP + * + */ +public class GlyphDictionary { + /** + * standard H, E, or C three state secondary structure assignment. + */ + static final public String PROTEIN_SS_3STATE="aasecstr_3"; // HE, blank or C + /** + * default glyph type attribute indicates a UTF8 character + */ + static final public String DEFAULT="utf8"; + /** + * kyte and doolittle hydrophobicity + * TODO: specify this glyph set. + */ + static final public String PROTEIN_HD_HYDRO="kd_hydrophobicity"; +} -- 1.7.10.2