From dbbe146185027d9cb041a83645985a6b1a26cb75 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Thu, 8 Dec 2005 09:17:41 +0000
Subject: [PATCH] EqualsignoreCase

---
 src/MCview/PDBChain.java |   20 ++++++++++----------
 1 file changed, 10 insertions(+), 10 deletions(-)

diff --git a/src/MCview/PDBChain.java b/src/MCview/PDBChain.java
index 5f23a26..0715b6a 100755
--- a/src/MCview/PDBChain.java
+++ b/src/MCview/PDBChain.java
@@ -195,26 +195,26 @@ public class PDBChain {
             try {
                 Bond b = (Bond) bonds.elementAt(i);
 
-                if (b.at1.resName.toUpperCase().equals("ASP") ||
-                        b.at1.resName.toUpperCase().equals("GLU")) {
+                if (b.at1.resName.equalsIgnoreCase("ASP") ||
+                        b.at1.resName.equalsIgnoreCase("GLU")) {
                     b.startCol = Color.red;
-                } else if (b.at1.resName.toUpperCase().equals("LYS") ||
-                        b.at1.resName.toUpperCase().equals("ARG")) {
+                } else if (b.at1.resName.equalsIgnoreCase("LYS") ||
+                        b.at1.resName.equalsIgnoreCase("ARG")) {
                     b.startCol = Color.blue;
-                } else if (b.at1.resName.toUpperCase().equals("CYS")) {
+                } else if (b.at1.resName.equalsIgnoreCase("CYS")) {
                     b.startCol = Color.yellow;
                 } else {
                     //int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at1.resName.toUpperCase())).intValue();
                     b.startCol = Color.lightGray;
                 }
 
-                if (b.at2.resName.toUpperCase().equals("ASP") ||
-                        b.at2.resName.toUpperCase().equals("GLU")) {
+                if (b.at2.resName.equalsIgnoreCase("ASP") ||
+                        b.at2.resName.equalsIgnoreCase("GLU")) {
                     b.endCol = Color.red;
-                } else if (b.at2.resName.toUpperCase().equals("LYS") ||
-                        b.at2.resName.toUpperCase().equals("ARG")) {
+                } else if (b.at2.resName.equalsIgnoreCase("LYS") ||
+                        b.at2.resName.equalsIgnoreCase("ARG")) {
                     b.endCol = Color.blue;
-                } else if (b.at2.resName.toUpperCase().equals("CYS")) {
+                } else if (b.at2.resName.equalsIgnoreCase("CYS")) {
                     b.endCol = Color.yellow;
                 } else {
                     //int atno = ((Integer) ResidueProperties.getAA3Hash().get(b.at2.resName.toUpperCase())).intValue();
-- 
1.7.10.2