From de8382f6945c5648785129ba7c4bb080287c2220 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 24 Feb 2006 11:37:35 +0000
Subject: [PATCH] Inform user of groups error parsing

---
 src/jalview/appletgui/AlignFrame.java |    5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 6d70bf7..7b8def3 100755
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -140,13 +140,14 @@ public class AlignFrame extends Frame implements ActionListener,
 
   public void parseFeaturesFile(String file)
   {
+    String line = null;
     try
     {
       URL url = new URL(file);
 
       BufferedReader in =  new BufferedReader(new InputStreamReader(url.openStream()));
       SequenceI seq = null;
-      String line, type, desc, token;
+      String type, desc, token;
 
       int index, start, end;
       StringTokenizer st;
@@ -228,7 +229,7 @@ public class AlignFrame extends Frame implements ActionListener,
     catch (Exception ex)
     {
       ex.printStackTrace();
-      System.out.println("Error parsing groups file: " + ex);
+      System.out.println("Error parsing groups file: " + ex +"\n"+line);
     }
   }
 
-- 
1.7.10.2